Fusarium oxysporum: FOXG_00368
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Entry
FOXG_00368 CDS
T04882
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Pathway
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_00368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fox03041
]
FOXG_00368
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_00368
Spliceosome [BR:
fox03041
]
Complex A
U2 snRNP components
U2 related factors
FOXG_00368
Complex B
FOXG_00368
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RPS31
Motif
Other DBs
NCBI-GeneID:
28942684
NCBI-ProteinID:
XP_018232281
UniProt:
A0A0J9U825
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All DBs
Position
1:2794472..2798210
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AA seq
1134 aa
AA seq
DB search
MPRTNFRLKKQRRDRSIDRRDDNYYRGGRRDHRERDRRRSRERYDDRNRSPDRRHNRSRE
GDRDVRRRGDSRNRTPGRREGTADSLTRSIREDGRTQKISLGDSGNPDTEEKPKADSGQP
EVNKKAERLAKLEAWKKKKENASQKQKEVNPSQTRNLLAEMDKKASGASSETVSPSVSAT
ASPAATPTVASPVVPYSGKFDPKAIAKKSAASRTHEGVKPALGSLGGQPEKLPVPAKPPV
PVKPSTSASALPANRTKASGFGFVKNNAETDKLPTKRKLDLDEEDTTKRKLTKLPALPIE
ADDTPYADQDDDESDGDNFAETEEEAAAAARAAHERRLQAENQMDTGEEESKTTEIQING
DTMLNNNAAQPDITTQMEVDEEEDDVDPLDAFMADLRQTDVKQPARTSKAQKIQEPEAYF
SDDEYDFNKKDTGDANALLAMTAKRKKKDIPAIDYSKIEIEPIRKNFWVEPAELSLLTEA
EVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVIDNLGFEKPTPIQMQALPALMS
GRDVIGVAKTGSGKTMAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHRDCKPF
LKMMGLRSVCAYGGAPIRDQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVL
DEADRMFDMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGRSV
VAKEIDQIVEVRDEPSKFLRVLELLGELYDRDEDARTLIFVERQEKADDLLKELMIKGYP
CMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVH
RAGRTGRAGNTGVAVTFVTPEQENCSVGIAKALEQSGQPVPERLDEMRKAHREKVKSGKA
KDTSGFGGKGLDRLDQEREAARLRERKTHKAEGEEEEVKEDKKEEEDDKAEKALSAIRAA
ASGVQARESAKAEGAEVKPTQQANITGGVKDKSKDPLDKVSSAVSAINSRLGKAGQLRAG
QPIDNKGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGNFYPPGKEV
PAGAEPKLYILIEGDTEVVVGSALSELTRLLREGTIAAADADSRAPASGRYTIT
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggacgaattttcgcctaaagaagcagagaagagaccgctctatagaccggcgc
gacgacaattattaccgaggtggacgacgagaccaccgcgaaagagatcgcaggagatcc
cgagaacgctacgatgatcgcaatcgatcacccgataggcgacacaaccgcagccgagaa
ggtgatcgggatgtgagaaggcgaggcgactcccgcaaccgcacccctgggcgccgtgag
ggtacggctgactcccttactcgcagcatccgtgaagatggtagaacacagaagatctca
cttggcgacagtgggaatcccgatactgaggagaaacccaaggctgattctggacagccg
gaggtcaacaagaaggctgaacgattagccaaacttgaagcgtggaagaagaagaaggag
aatgcgagccagaaacaaaaagaagtaaaccctagccagacaaggaacctcttggctgaa
atggacaagaaagcgagtggggcgtcctcagaaacagtttctccatcagtttctgcgact
gcttcgccggctgcaacaccgactgttgcttcacctgttgtcccatactctggcaagttt
gaccctaaggccatcgcaaagaaatcggcagcttcccggacacatgaaggcgtaaaacca
gccttgggctctctgggggggcagcccgaaaagctcccggtccctgccaagcccccagtg
cctgtaaaaccgtctaccagcgcatcggctctccctgcgaatcgaacaaaagctagtggg
tttggattcgtgaagaataatgcagaaactgacaagctccccactaaacggaagcttgac
ttggatgaagaagacacgactaaacgaaaacttactaagcttcctgccctgcccatcgag
gctgacgacactccatatgccgatcaggatgatgatgaatccgatggggacaacttcgcg
gagactgaagaggaggccgccgccgctgctcgtgcagctcacgagagacggttgcaggca
gagaatcaaatggatacgggtgaggaagagtcaaagacgaccgaaatccagatcaatgga
gataccatgttgaacaacaacgccgctcaacccgacatcaccacacagatggaggttgac
gaggaggaggatgacgtcgacccactggatgcattcatggctgatctcaggcagacagac
gtgaaacaaccggctaggacatccaaagcacaaaagatccaggagccggaggcttacttc
agcgacgatgaatatgatttcaataagaaggacacgggtgacgcaaacgccttgctagcg
atgactgcgaagcgaaagaagaaagacattccggcgattgattacagcaagatcgaaatt
gaacctatccgcaaaaacttctgggtcgagccagctgaactcagcctactcacagaggcc
gaggtagctgatcttcgcctagaactcgacggcatcaaagtcaacggaaaggatgttccc
aagcctgttcagaaatgggcgcaatgtggtctgacgcgacaaacactcgacgtcattgat
aacttaggctttgagaaacctacccccatccagatgcaggctcttcctgctctcatgtct
ggccgcgatgtcatcggagtggcgaagactggttcaggaaagacaatggctttcttgctt
cccatgttccgacacatcaaggaccagcctccattgaaggatacagatgggcctatcgga
ttgattatgactccaacacgagaacttgcagtccagattcatcgagactgtaaacctttt
ctcaagatgatgggtcttcgatctgtctgtgcttacggtggagcgcccatccgagatcag
attgctgaacttaagcgtggcgcggagatcattgtgtgtacacctggtcgaatgatcgat
cttctagctgcgaaccaagggcgggttactaatctcaagcgagttacatatgttgttctt
gatgaagctgatcgaatgttcgatatgggtttcgagcctcaggtcatgaagatcttcgca
aacatgcgacctgacaggcagactatcctcttctcggctacgatgcctcgcatcatcgac
tcgctgaccaagaaggtactcaagaatcctatcgaggttacagtgggcggtcgtagtgtt
gtggcaaaggagattgatcagatcgttgaagttcgagatgagccatccaagttcctgcgt
gttctcgagctgcttggagagctctacgaccgtgatgaagatgcccgcaccctcattttc
gtggaacgtcaagaaaaggccgacgatttattgaaagagcttatgatcaagggttacccc
tgcatgtccattcatggaggtaaagatcagattgatcgtgattctaccatctcagacttc
aagaagggtgtagtgcctatcttgatcgctacttcggtggcagctcgtggtcttgatgtc
aagcaactcaagctcgttattaactacgatgcaccgaaccacttggaggattatgttcat
cgtgctggccgaactggtcgtgctggcaatactggtgtcgctgtcacattcgtcacgcca
gagcaggagaactgctctgtcggcattgccaaggctcttgaacagagtgggcagccggta
ccagaaaggctcgacgagatgaggaaagctcatcgtgaaaaggtcaaatcaggcaaggcc
aaggacacatctggctttggcggtaagggtctcgatcgtcttgatcaggaacgtgaggct
gcccgtctccgcgagcgcaagacccacaaggccgagggcgaggaggaggaggtcaaggaa
gataagaaggaagaggaggacgataaggcagagaaggctctcagtgcgatccgcgcggca
gcatcaggcgttcaagcccgcgagtcagcaaaggctgaaggcgcagaagtgaagcctacc
caacaggcaaacattactggtggagtaaaagacaagtccaaagacccgctcgacaaggtc
agttcagccgtctccgccatcaacagccgcctcggaaaggctggccaacttcgtgctggt
cagcccatcgacaacaagggcccagatgctggtgcgttccatgccacattggaaatcaac
gatttccctcaaaaggccagatgggctgtcaccaaccgaaccaacgtagccaagatccta
gaggctacaggtacatcgatcacaacgaagggcaacttttacccaccgggcaaagaggtt
cccgcaggagccgaaccaaaactgtatattctcatcgaaggcgataccgaggttgttgtc
ggatccgctctcagcgaactcacacgcctattaagagagggaacaatagctgctgcagat
gccgacagtcgagcaccagccagtggacgatatacaattacctag
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