Fusarium oxysporum: FOXG_00837
Help
Entry
FOXG_00837 CDS
T04882
Name
(RefSeq) ATP-dependent RNA helicase ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
fox
Fusarium oxysporum
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fox03009
]
FOXG_00837
Enzymes [BR:
fox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FOXG_00837
Ribosome biogenesis [BR:
fox03009
]
Eukaryotic type
90S particles
Helicases
FOXG_00837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF4736
Motif
Other DBs
NCBI-GeneID:
28943129
NCBI-ProteinID:
XP_018233166
UniProt:
A0A0J9UAK8
LinkDB
All DBs
Position
1:complement(4250838..4253421)
Genome browser
AA seq
693 aa
AA seq
DB search
MDILKVLSRGTKKTQKNSQNSSNAQQKLPSAGTSTNPQLYHDQVRGQKRKRTKNEPEPEA
HDELPEVDFFAPKPEPVAKAAVETEEPVQVPKPTRPSRLLSEDECRQLLRSHRLKITLLS
KSEDQSKVKKSKKKKKAAVEVKKDGKKQLFPQPLDSFSELRNAYGLSNKVADNLVFQGYR
VPTEVQMGSLPLLVHPQAALKDEDGLEAGVDFLAIAPTGSGKTISFLIPAINNILRRRSQ
QSLRDIHELEAIIVAPTRELVHQIVSEGQKLAQGTGLKVVSMKKHTQLSAEQVDMAEDGS
EDEEDKESDSEDEDENKADDKPKQITKADILVTTPFLLLKFLTSGPPSTQKVLPTVRDLI
LDEADVLLDPLFRDAMMSDWTACTNPDLRVSFWSATMGSNIESMVTEKLTSRAQSLGITP
KPFVRLVVGLKDTAVPNIAHKLIYTATEQGKLLALRQLLHPTAADDSGPPLRPPFLVFTQ
TIDRATALHEELQYDIPLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWVLITTDVLA
RGVDFAGVNGVVNYDVPGSSAGYVHRAGRTGRAGREGGVAVTFYTKEDIPFVKMVANVIA
ASEKQAGKTGDEAGVQKWLLDALPNVGKADRKKLKERGVEARRSGNKAKITSKSGYERRK
ENNRRGAIEGSKKRKLQANEDSGDDGEWGGFDD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctcaaggttctatcgcgtgggaccaaaaagacacaaaagaacagccaaaac
tccagcaatgctcagcagaagcttccctcggctggtacatccacgaaccctcagctctac
catgatcaggtccgcggccagaagcgaaagcgaacaaagaatgagcccgaacccgaagct
cacgacgagctccccgaagttgacttctttgcccccaagccagagcctgtagccaaggca
gctgttgagacagaggagcccgttcaagtaccgaaacctacacggccgtctcgattgttg
agtgaggacgagtgtcgccagctgctacgatcgcatcgattgaagattactctcctctcc
aagtcagaggatcagtctaaggtcaagaagagcaagaaaaagaagaaggcggctgttgaa
gtgaagaaggatggaaagaagcagctcttcccacagcctttagactcttttagcgagctg
cgcaatgcctacggtctctcaaacaaagtcgccgataaccttgtattccagggataccga
gttcctactgaagttcagatgggtagtcttcctcttctcgtacacccccaggctgccctg
aaagacgaagatggactcgaagcaggagtcgatttcctcgcaatcgctcccacaggaagc
ggaaagaccatcagtttcttaattcccgctatcaacaacattttgcgcaggcgctcgcag
caaagcctccgcgatattcacgaactcgaggcgattattgttgcaccaacccgcgaattg
gtgcaccaaatcgttagcgaaggacagaagcttgctcaaggaacaggtctgaaggtcgtt
tcgatgaagaagcacacacaactttcagccgagcaagtggatatggcagaagatggctca
gaagatgaagaggacaaagagtcggattctgaggatgaagatgaaaacaaggcagacgac
aagcccaagcaaatcacaaaggctgatattttggtcaccacaccctttctcttactaaag
tttctcacctcaggacctcccagcacacaaaaggttctgcctactgtaagagacttgata
ttggatgaggcggatgttttacttgaccctcttttccgagatgccatgatgtctgactgg
acagcatgcacaaaccccgacctgagggtgtcattttggtctgctacgatgggctcaaac
attgagtccatggttacagagaagttgacttcaagagcacagtcgctgggtatcacaccg
aagccctttgtgcgactagtcgtcggtctcaaggatactgctgttccaaacattgcccac
aagcttatctacaccgcgactgagcagggcaaactactagcattgcgccagctgctgcac
cctacggctgctgatgattcgggtcctcctctgcgaccccccttcttggtctttacgcaa
acaattgaccgagcgactgctctgcacgaggaactacaatatgacattcctctcgaggct
ggtggtgcagcgagaattgcagcccttcacagtggtctcacagactctgctcgatcttcc
atcatgcgcaagttccgtgctggagacatctgggttctgatcacaacagatgtgttggca
cgaggtgtagactttgccggtgtcaacggtgttgtcaactacgatgtccccggttccagc
gccggctacgtccaccgcgcaggacggacaggccgagcaggtcgcgaaggtggcgtggca
gtcacattctacaccaaggaggacattcccttcgtcaagatggtcgccaatgttatcgct
gcaagcgagaagcaggctggcaaaacaggagatgaggctggggtgcaaaagtggctcctg
gatgctctccctaatgtcggcaaggcagaccgcaagaagctcaaggagcgaggtgtggaa
gcgcggcgaagtggaaataaggccaagatcacgtccaagagtggctatgagagacgaaag
gagaataaccgccgcggtgctattgagggtagcaagaagaggaaattacaagcaaatgag
gacagtggtgatgatggtgaatggggtggttttgatgactag
DBGET
integrated database retrieval system
