Fusarium oxysporum: FOXG_09474
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Entry
FOXG_09474 CDS
T04882
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
fox
Fusarium oxysporum
Pathway
fox03013
Nucleocytoplasmic transport
fox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FOXG_09474
09122 Translation
03013 Nucleocytoplasmic transport
FOXG_09474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fox03019
]
FOXG_09474
03041 Spliceosome [BR:
fox03041
]
FOXG_09474
Messenger RNA biogenesis [BR:
fox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
FOXG_09474
Spliceosome [BR:
fox03041
]
Complex C
Other components
EJC/TREX
FOXG_09474
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FOXG_09474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
AAA_18
MMR_HSR1
AAA_16
Viral_helicase1
AAA_22
AAA_33
nSTAND3
AAA_14
RsgA_GTPase
NTPase_1
AAA_7
AAA_29
Motif
Other DBs
NCBI-GeneID:
28951036
NCBI-ProteinID:
XP_018246760
UniProt:
A0A0J9VCE1
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All DBs
Position
9:complement(1808797..1812027)
Genome browser
AA seq
822 aa
AA seq
DB search
MAAQEIDNPAAPAITAFTTLLEEFLSQAETAKPTSAIEPALRKSDFDDLSGRVSRTADDV
SSPAAEGAASTIDKGRQFAIIETAARNIFSQLIATTTIDSPYYVKVWNLLDILSILSDDG
QCDPALLFWLAEELLDSQTIAGCRKIFDFLESRRERITANHFKQKQLIILRTCNELLRRL
SRAEDTAFCGRVFIFMFQSFPLGDKSSVNLRGEYHVENVTTYEATRAEDESKMVVDEPEE
QLNEQAESKSTPKSADAKKADKEKPLSTDELYPLFWSLQEYFSQPKKLFETTNLTSFKEG
LAATMKVFQTVHNDSRRSLKRKRESGEEDESSNTFNPKYLTSKDLFDLEISDLSFRRHIL
VQALIIMDFLISLSIQARERLTEALPVNASVNKAVMYSDQVLSDEDAEWASDMKKTIADY
LRQGADGPYFYRMVETVLARDKNWVRWKIEGCHPIKRDPVSPASFLEAKANVQKMATSKR
LRSVPMGSVSLDFLKEEDEETAMSRLKAKERYELPELDTFKRKIADDDFEIDMPTNDQTK
AAAIAGKVSKSWRALRIAARSKLAALDKIEDPKKIDIVFEELTEVDDIEDTAEPTANEED
MPSNREPIIISGITGVGKSTIIRKLMEERKGVFAPVVRHTTREPVEGEVNGKSFHFVKQQ
EFNQLRDGDRLIESGTRDGVDYGTSFKAIEAISESGKVPIIELDIEAAQYAKDMDFQARY
VLITTSTPELLKQRLEASGKEESAIQDILKKFSTELESRKVDELFDTSIVDDDDVEAVKA
IGNYIYGESEGKQGLSEDTAMKDEEEDTTKVAETKEATMTDS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcaagagatagacaatccagctgcaccggcgatcacagctttcacgactctg
ctagaagaattcctttcccaagcagagaccgccaagccaacatcagcgattgagccagcg
ttgcgcaagtccgatttcgacgacctctcaggccgagtatccagaaccgcggacgatgtt
tccagcccagctgctgaaggtgctgcatcaacgatcgacaaaggacgacagtttgctata
atagaaactgccgctcgtaacatattcagtcaactcattgcgacaaccaccatcgattct
ccctactatgtcaaggtgtggaacctcctcgatatcctgtcgattctttccgacgatgga
caatgtgatcccgcgctgttgttctggctagcagaggaactactggacagtcaaactatt
gctggctgtcgtaagatctttgatttccttgagtcgaggagagaacgaatcacagcaaac
catttcaaacaaaagcaattgattattcttcgaacatgcaatgaattgctacgccgacta
tctcgtgcagaagatactgctttctgcggtcgcgttttcatcttcatgttccaaagcttt
cctctgggcgacaagagttctgtgaacctacgaggcgaataccatgtcgagaatgtcacg
acctacgaggcgacgcgggcagaggatgaatctaagatggttgtggacgagccagaagag
caactaaatgagcaagcagagtcaaagtccacacccaagtcagccgatgccaaaaaggca
gacaaagagaagcccctatcgacagacgagctttatccactattctggtcccttcaggaa
tacttcagtcaacccaaaaagctttttgagactaccaatctgacgtctttcaaagagggt
ctagcagccacaatgaaagtctttcaaacagtgcacaacgattcaagacgaagcctcaaa
cgaaaacgagagagtggagaagaagatgagagttctaacacattcaatcccaaatatctc
actagtaaagatttattcgacttggagatcagtgatttgtctttccgacgacatattctt
gtgcaagctctcatcatcatggatttcctcatctcactatccatccaagcacgagagcga
cttacagaagctctccccgtcaatgccagcgtaaataaggccgtcatgtacagtgaccaa
gtcctgagtgacgaagacgctgaatgggctagtgacatgaaaaagactattgcggactac
ctccgccagggtgctgatggtccatatttttatcgaatggtagaaaccgtgctggctaga
gacaagaactgggttcgctggaagattgaaggctgtcaccccatcaaacgagacccagtc
tcgccggcatcctttcttgaggcaaaggccaatgttcagaaaatggctaccagcaagcgg
ctaaggtcggtccctatgggctctgtctccctggactttctcaaggaggaggatgaagag
acagcgatgagtcgactcaaagccaaggagcgctatgagctaccagagctcgacacgttc
aaacgtaaaattgccgacgacgattttgagatcgatatgccaacaaacgaccaaaccaaa
gctgctgctatcgctggcaaggtcagcaagagctggagagcactacgaatcgcagcgcgc
tcaaagcttgccgcgctcgacaagatcgaagatcctaagaagattgatatcgtgttcgag
gagcttacagaagtggatgatatcgaggacactgctgagcccacagcaaatgaagaagat
atgccctccaaccgagaacctatcatcatctctggcattacaggcgtaggcaagtcaacc
atcatcagaaaacttatggaagagcgaaagggagtgttcgctcctgttgtccgccatacc
acacgagagcctgttgagggtgaagtcaacggcaagagtttccactttgtcaagcaacaa
gagttcaaccagctacgagatggggaccgcttgatagaatcaggtactcgggacggcgtc
gattacggaaccagtttcaaggccatcgaggctatctcagagagtggcaaagtgccaata
atcgaactagatatcgaggctgcccaatatgccaaagatatggacttccaggcacgctac
gtgctcattacgacgtctacccctgaacttctcaagcagcgcctcgaggcttcgggcaaa
gaagaatctgccattcaagatatcttaaagaaattttctacagaacttgagtcgagaaag
gtcgacgagctgtttgacacatcaattgtcgacgacgatgacgttgaagcagtcaaggct
attgggaattacatatatggggaaagtgagggcaagcagggcttgagtgaggacacagct
atgaaggacgaggaggaagataccaccaaggtcgccgagacaaaggaggccacgatgaca
gattcataa
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