Flavobacterium panici: NLJ00_17990
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Entry
NLJ00_17990 CDS
T08520
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fpb
Flavobacterium panici
Pathway
fpb01501
beta-Lactam resistance
fpb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fpb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLJ00_17990
01503 Cationic antimicrobial peptide (CAMP) resistance
NLJ00_17990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fpb02000
]
NLJ00_17990
01504 Antimicrobial resistance genes [BR:
fpb01504
]
NLJ00_17990
Transporters [BR:
fpb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NLJ00_17990
Antimicrobial resistance genes [BR:
fpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLJ00_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
DUF6286
DUF1077
Ndc1_Nup
Motif
Other DBs
NCBI-ProteinID:
UUF13153
LinkDB
All DBs
Position
complement(4276523..4279618)
Genome browser
AA seq
1031 aa
AA seq
DB search
MSLSTTSIRRPVLTIVLNLLIILFGFIGYTFLGVREFPSIDPAQVSIRTNYTGANSDIIE
SQITEPLEKAVNAIDGIRNITSSSNQGSSNITIEFNLDKNLEEAANDVRDKVSQAVRSLP
QDIDAPPVVSKADADSESIISMTVQSDTRSSLELSDYAENVISQRLETIPGVSGVQIWGQ
KRYAMRLWIDPIKLNAYNCTVADVRDALNAQNVELPSGKLTGNNTELTVKTIGNLSKPEE
FNNIIIRTDGEKIVRLSDVGGAELGPENIETSLTSSGLPMIGLAIVPMPGANYLDISKEF
YKKYDALKKDLPKDIKLNIALDNTLFVKKSVLEVAETLGISIILVIIIIYLFFRDWAIAF
RPLIDIPVSLIATFFIMWLFGFSINVLTLLAIVLATGLVVDDGIVVTENIFKKVEEGMSP
IEAAIKGSNEIFYAVISISVTLAAVFLPVIFLEGFVGRLFREFGVVIGAAVLISAFVSLT
LTPMLNAYLMKGGEQKKSKFYIKTEPFFEKMNSGYAESLTKFMDKKWISFPILIACFGLI
YLFFTILPKETAPYDDRSSVTMRMTTPEGSSYEYTNRFMQEISKLVDDSIPEKKVSLVIT
AGGSGGSATNSGFIRLSLKEPDERNKSQKDIADQLSKWTKKYPDAKTSVIQQPTIAVNRR
GGLPIQYIIQAPTFEKLREKIPVFMNEVGKSDVFSTTDVNLKFNKPEINVSIDREKAESL
GISIIDIAQTLQLSLSGQRFGYFIKNGKQYQVIGQFDQKDRSKPLDLTSMFVKNKSGQLI
QMDNVVNVVEQSNPPQLYHNNRYMSATVSAGLAPGKSISDGIEEMDRIKAKVLNESFTTD
LSGESRDFVESSSNTSFAFGLALLLIFLILAAQFESFIDPLIIILTVPMAVAGTLFSLWL
FNQTWNIFSQIGTVMLIGLVTKNGILIVEFANQLREQGKPKMEAILEASEARLRPILMTS
LAIALGALPIAMSLGAASTSRIGMGVVIVGGTIFSLALTLFVIPAIYFMWSKARKHYPEF
DRIDEYEKESK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatcaactacaagtataagaagacctgttttaaccattgtactgaatctatta
attatattattcggttttattggttatacatttttgggtgttcgtgaatttccttccatc
gatcctgctcaggtttctattagaaccaattatacaggagccaattctgatattatagaa
tcacaaattacggagcctcttgaaaaagcagtaaatgcaattgacggaattcgaaacata
acatcatccagtaatcagggaagcagtaacattaccatcgaatttaatctggataaaaat
ctggaagaagccgcaaatgatgttcgtgacaaagtttcgcaggctgttcgaagtttacct
caggatattgatgcgccgccggtggtttctaaagccgatgcagatagtgaatctattatt
tcgatgacggttcagagcgatacccgaagttctttagaactaagcgattatgccgaaaat
gtaatttcacagcgcttagaaactattcccggagtaagcggggttcaaatttggggacaa
aaacgttatgcgatgcgtttatggattgatccgataaaattaaatgcttacaactgtact
gttgctgatgttcgggatgccttaaatgcgcaaaacgtagaattaccttctggaaaatta
actggaaacaataccgaattgaccgtaaaaaccattggaaacctttcgaaaccagaagaa
tttaataacattatcattagaacagacggagaaaaaattgttcgtttgagcgatgtgggc
ggtgccgaactaggacctgaaaatatcgaaacttctttaacatcttcgggacttccaatg
attggtttagccattgtaccaatgccaggagccaattatcttgatatttcgaaagaattc
tataaaaaatatgatgctttaaaaaaggatcttccaaaggatataaaactaaatattgca
cttgacaatacgctgttcgtaaaaaaatcggtacttgaagttgccgaaactttaggaatt
tcgatcattctggtaatcattattatttatcttttctttagagactgggccattgcgttc
aggcctttaattgatattcccgtttcgttaattgctactttctttatcatgtggcttttc
gggttttccatcaatgtattgactttattagccattgttttggcaacaggattagttgta
gatgacggaattgtagtaactgaaaatatctttaaaaaggtcgaagaaggaatgtcgcca
attgaagcagctattaaaggttctaatgaaattttctatgctgtaatctctatttcagta
acacttgcggcggtatttttgcctgtaattttcctagaaggtttcgtaggccgactcttt
agggaatttggggtcgttattggtgcggctgtattaatttctgcctttgtatccttgact
ttaacgccaatgttaaatgcttatttaatgaaaggcggagaacagaaaaaatcaaaattc
tatattaaaacagaaccatttttcgaaaaaatgaatagcggttatgcggagtctttaacc
aaattcatggataaaaaatggatctccttccctatccttattgcttgttttggattgatt
tatttgttttttactatactcccaaaagaaactgctccttatgatgacagaagttcggta
accatgagaatgaccactccagaaggctcttcttatgaatataccaaccgttttatgcag
gaaatatcaaaattggttgatgattctattccggagaaaaaagtcagcttggtaattacc
gcaggaggttccggaggttctgcaacaaattccggttttatcaggctttcgctgaaagaa
ccagacgaaagaaacaagtctcaaaaagatattgctgatcaattatcaaaatggacaaaa
aaatatccagatgctaaaacatcggtaattcagcagcctacaattgccgtgaaccgacgt
ggaggtcttccgattcagtacattattcaggctccaacttttgaaaaactaagagaaaaa
atccctgtttttatgaatgaagtaggtaaaagcgatgttttctcgacaacagatgtcaat
ttaaaatttaataaacctgaaatcaacgtaagtatcgatcgtgaaaaagcagagagttta
ggaatttctattattgatattgcacaaactttacagctttcgttaagcggacagcgtttt
ggatatttcattaaaaacggaaaacaatatcaggttattggccagtttgatcaaaaagac
agatcaaaaccgctggatttaacttcgatgtttgtaaagaacaaaagcggacaattaatt
caaatggacaatgttgtaaatgttgtcgagcagagtaatccgccgcaattgtaccacaac
aatcgctatatgtctgcaaccgtttctgcaggtttagcaccgggaaaaagtatcagcgac
ggtattgaggaaatggacagaattaaagccaaagttttaaacgaaagttttacaacagat
ttaagtggagaatcgcgagattttgtcgaaagtagttcgaatacatcttttgcatttgga
ttagctttattattgattttcttaattcttgcggcacaattcgagagttttatcgatccg
cttattatcatattaacagtaccaatggcggttgccggtaccttattttcactttggtta
ttcaatcagacctggaacattttcagccagattggaaccgtaatgcttattggtctggtt
acgaaaaatggtattttgatagtcgaatttgccaatcagttacgagagcagggcaaacca
aaaatggaagccattcttgaagcatcagaggcacgtttacgtccaattttaatgacgagt
ttagcgattgcattaggagcattaccaattgcaatgtcacttggagcagcttctactagt
agaattggtatgggagttgtaattgtaggaggaactattttctctttggcgctgactctt
tttgtgattcctgcaatttattttatgtggtctaaagccagaaaacattatcctgaattt
gatcgtatcgatgaatacgaaaaagaaagtaaataa
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