Fontisphaera persica: NXS98_06995
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Entry
NXS98_06995 CDS
T09048
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
fpes
Fontisphaera persica
Pathway
fpes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NXS98_06995 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpes03400
]
NXS98_06995 (uvrA)
DNA repair and recombination proteins [BR:
fpes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NXS98_06995 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NXS98_06995 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
UvrA_DNA-bind
UvrA_inter
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_22
nSTAND3
AAA_25
NACHT
DnaJ_CXXCXGXG
AAA_18
RsgA_GTPase
AAA_14
MobB
cobW
Viral_helicase1
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WCJ60868
LinkDB
All DBs
Position
1971146..1974154
Genome browser
AA seq
1002 aa
AA seq
DB search
MASKSGPSCIRLRGVRHNNLKNFDLDLPLGRLVVITGLSGSGKSSLAFDTLFAEGQRRYI
ETFSPYARQFFDRMDKPAVDSIEGIPPAIAIEQRNTVRSTRSTVGTMTELCELLKQLWPH
LAQLHCSGCGQPVRREPPEIVWEIISAHWPDQEVLVTFDLPLTAKLSLKECLHLIQRQGY
RRLLIEGQIVEIDQASPGWQSSHPASVTVIQDRLRLSPAHRSRAVEACEQAYHFGHGRLR
VWPLREGRPAPGEARSFSLHWHCAPCNLAYPPPVPSLFSFNHPAGACPACKGFGRIITVD
YRRALPDPSKTLKEGAIKPWQSGMSRECQDDLMTFCKKRGVPVNVPFRDLPPDIQKWVIE
GDPDYGKDAAHQWPHCWYGLRGYFRWLESKTYKMHVRVLLSRYRTYTLCPSCNGTRLKPE
ALNYRLPPPCPPLTLPAFHRLTLQEALQVAMQLRQAHSWESHHPLAVVLDEVCARLGYLV
EVGLGYLTLDRPTRTLSGGETERVNLATCLGTRLVNTLFVLDEPSVGLHPRDTHRLVKLL
QRLRDAGNTVVVVEHEPLIIQAADQVVDLGPGHGAEGGHLVFQGSLSELQQCPPSLTGAY
LSGRRQIPLPVRRMVKDEDPRLVIRHANAHNLKDLTVEIPLGRFVALTGVSGSGKTTLLR
DVLLPLLAARFTGLTVETSKDTETAEDEPGDWENEPEPASAATLEGAEALGHVVWVDQSP
IGRTPRSNPALYTGAFEALREFFAQLPMAASAGLKASDFSFNSARGQCAYCRGAGFEKVE
MQFLSDVFIRCPACQGRRYRSEVLNITFSDPQSPARSYSIADVLEASVEEVQALMERFPD
SAPARRAAAALQVLQDVGLGYLRLGQPINTLSGGECQRLKLARHLAEFSMATHPASSQPT
LFLFDEPTTGLHWEDVRVLLEVFKKLVDQGHSLLVIEHNLEVIKAADWLIDLGPEAGAEG
GRIVICGPPEIVAGCEASHTGAALRADTQFAQHWRTASSPVA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaagtccgggccgtcctgcatccgcctccgcggcgtgcggcacaacaatctc
aaaaatttcgatctcgacctgcccctcggccggttggtggtcatcaccggcctcagtggc
tccgggaaaagctccctggcgtttgacaccttgtttgcggaaggccagcgccggtacatc
gaaactttttccccctacgcccggcagttctttgaccgcatggacaagcccgcggtggac
agcatcgagggcattccccccgccattgccattgagcaacgcaacaccgttcgctccacc
cgctccaccgtcggcacgatgaccgagctgtgtgaactcctgaaacagctctggcctcac
ctggcccagctccattgctccggctgcggccagcccgtccgccgtgagccccccgaaatc
gtttgggaaatcatctccgcccattggccggaccaggaggtgctggtgacttttgatttg
ccgctcacggccaaactcagcctgaaagaatgtctgcatctcatccagcgtcagggttac
cgccgcctgctcattgaaggacagattgttgaaattgaccaggcttcccccggctggcaa
tcctcccaccccgcctccgtcaccgtcattcaggaccgcctgcgcctctcccccgcgcac
cgttcccgcgcggtggaggcctgcgagcaggcctatcatttcggccacgggcgtttgcgc
gtctggcccctgcgcgagggccggccggcgcccggcgaagcgcgttcattcagcctgcat
tggcactgcgcgccatgcaacctggcttatcccccgcccgtgccttcgctcttctccttc
aatcatcctgcgggcgcctgcccggcctgcaagggctttgggcgcatcatcaccgtggat
taccgacgcgcccttcccgacccctccaaaacgctcaaggaaggggccatcaagccatgg
caaagcggcatgagccgcgaatgtcaggacgatttgatgaccttctgcaaaaagcgcggc
gtgcccgtcaacgtgcctttccgggatttgccgcccgacattcaaaaatgggtgattgaa
ggtgaccccgattatggcaaggatgccgcccaccaatggccccattgctggtacgggctg
cgcggttatttccgctggctggaatcgaaaacctataaaatgcatgtgcgcgtgctgctg
tcacggtaccggacctacaccctttgcccttcctgcaacggcacgcgcttgaaaccagaa
gccttgaattaccggctgccgcccccctgccctccgctgaccctcccggcatttcaccgg
ctgactctgcaggaagccctgcaagtggccatgcaactgcggcaggctcattcctgggaa
agccatcatccgctggcggtggtattggatgaggtttgcgcacggctcggctacctggtg
gaagtggggctgggttacctgaccctggaccgtcccacgcgcaccctctccggcggcgaa
accgagcgcgtcaaccttgccacctgcctgggcacccgcctggtgaacaccttgtttgtt
ttggatgaacccagtgtcgggttgcacccgcgggacactcaccgtctcgtcaaattactc
caacgcctgcgcgatgccggcaacaccgtcgtggtggtcgagcatgaacctttgatcatc
caggcggccgatcaggtggtggatttaggcccgggccacggcgcagaaggcggccatctg
gtgtttcaaggtagtctatcagagctccagcaatgcccgccctcactcaccggcgcttat
ctaagcggccggcggcaaatccccctgcccgtgcggcggatggtaaaggatgaggacccg
cgcctggtcatccgccatgccaacgcccacaacctcaaggatttgacggtcgagattcca
ctggggcggttcgtcgccctcacgggcgtcagcggctccggcaagaccacactgttgcgt
gatgtcctgctgccgttgctcgcggcccgtttcaccgggttgacggtcgaaacctccaaa
gacaccgaaacggcagaagacgagccaggagactgggaaaacgagccggagccagcctcc
gcagctactttggaaggcgcagaagcactcgggcatgtggtttgggtggatcaatccccc
atcggccgcacgccccgctccaacccggccttgtacacaggcgccttcgaggctttgcgc
gaattttttgcgcaattgcccatggccgcttctgccgggcttaaggccagcgacttcagc
ttcaactccgcccgcggccagtgcgcgtactgccggggcgccggctttgaaaaagtggaa
atgcaattcctgagtgatgtgttcattcgctgcccggcctgtcagggccgcaggtaccgc
tcggaagtgttgaatatcaccttttccgacccccaatcgcccgcgcgctcttatagcatt
gcggatgtgctcgaagcttcggtcgaagaagttcaggcgctgatggagcgtttccctgat
tcggcgcctgcccgccgggccgcggcagccctgcaggttttgcaggacgtagggctgggc
tatttacggctgggccagcccatcaacaccctttccggcggcgagtgccagcggcttaag
ctggcccgccatctcgccgaattttccatggcaacccaccccgcctccagccagcccacc
ctgttccttttcgatgagccaaccaccggcctgcattgggaggacgtgcgcgtgctgctg
gaggtcttcaaaaagttggtggaccagggccattcgctgctggtcatcgagcacaacctc
gaagtcatcaaagccgccgattggttgattgacttgggccccgaggccggcgccgagggt
ggccgaatcgtcatttgcgggccgccggaaatcgtggcgggttgcgaggcgagtcatacc
ggcgcggccctccgagccgatacccagtttgcccagcattggcggacggcatccagcccg
gttgcctga
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