Falco peregrinus (peregrine falcon): 101923816 Help Entry 101923816         CDS       T02856                                  Symbol UPF1 Name (RefSeq) UPF1, RNA helicase and ATPase   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism fpg  Falco peregrinus (peregrine falcon) Pathway fpg03013   Nucleocytoplasmic transport fpg03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:fpg00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     101923816 (UPF1)    03015 mRNA surveillance pathway     101923816 (UPF1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fpg03019]     101923816 (UPF1) Enzymes [BR:fpg01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      101923816 (UPF1)     5.6.2.5  RNA 5'-3' helicase      101923816 (UPF1) Messenger RNA biogenesis [BR:fpg03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      101923816 (UPF1)    mRNA cycle factors     Common to processing body (P body) and stress granule      101923816 (UPF1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII SLFN-g3_helicase ATPase nSTAND3 Helicase_RecD DEAD UvrD-helicase AAA_16 SRP54 UvrD_C_2 AAA_22 Motif Other DBs NCBI-GeneID:  101923816 NCBI-ProteinID:  XP_005235055 LinkDB All DBs Position Un AA seq 1045 aa AA seqDB search MYAVNGPDGILQNGAVDDNVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPAC VVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFL LGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLR ARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLE ADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPL WKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVD ETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGP PGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAID SPVSFLALHNQIRNKDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVI CCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCK KAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKK GFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGII TPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFL NDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQF SKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGP SHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKGKTGRGGRQKNRFGIPGTSQS NLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDV ALSQDSTYQGERAYQHGGVTGLSQY NT seq 3138 nt NT seq  +upstreamnt  +downstreamnt atgtatgcagttaatggacctgatggcattctacagaatggagctgtggatgataatgtg gctaaaaccagccagcttctggcagagttgaattttgaagaagatgaagaagatacctat tatacaaaggatcttcctgtgcatgcttgcagctactgtggcatccatgaccctgcctgt gtggtctactgtaacaccagcaaaaagtggttctgtaatgggcgtggaaatacatctggc agccacattgttaatcatcttgtgagagcgaagtgcaaagaggtgactctccataaagat ggacctctaggagagactgtcttggaatgttataactgtggatgtcgtaatgtgtttctc cttggctttattccagctaaggcagactctgtggtggttttgctgtgcaggcagccatgt gccagtcagagcagtttaaaggatattaattgggacagttcacagtggcagcctcttatc caagatcgttgtttcctttcatggctggtaaagattccatccgaacaggaacagttgaga gcacgtcagattacagctcaacagattaacaaactggaagaactttggaaggaaaatcca tctgcaacccttgaggacttagaaaagcctggtgttgatgaagaaccacagcatgttctg cttagatatgaagatgcttatcaataccaaaatatatttggtcctctagtcaagcttgag gcagactatgacaagaaactcaaggagtctcagacacaagataacatcacagtgagatgg gacttgggcttgaacaagaaaaggattgcttatttcactttgccaaagactgattcagat atgcgtcttatgcaaggagatgagatctgcttgaggtataaaggagacctggctccttta tggaaaggaattggtcatgttatcaaagttcctgataattatggtgatgagatagccatt gagctgaggagcagcgttggagcacctgtggaagttactcataacttccaggtggatttt gtatggaagtcaacttcctttgacagaatgcagagtgctttaaaaacatttgctgtggat gagacttcagtgtctgggtacatctatcacaaactgttaggtcatgaggtagaagatgta attattaaatgccagttgccaaagcgctttacagcacaaggacttcctgatctcaaccat tctcaggtttatgctgtgaagactgtcctgcagcgtcctctgagccttattcagggtccc cctggtactggaaaaacagtgacatcagccacaatcgtctatcatctggctagacaaggc aatgggcctgtgttagtctgtgctccaagtaatatagctgtcgatcagttgactgagaag atccatcaaactggactgaaagtggttcgtctgtgtgctaaaagtcgtgaggcaattgac tctcctgtctccttcttggcattacataaccagatcagaaacaaggatagcatgccagag cttcagaaactgcagcagcttaaagatgaaactggagaactgtcatctgctgatgagaaa cgttaccgtgcactgaaacgaacagcagagcgtgaattacttatgaatgcagacgtgatc tgttgcacgtgtgtgggagctggtgatccaagacttgcaaaaatgcagttccgctccatt ctgattgatgaaagcacccaggctactgagccggagtgcatggtgccagttgtcctggga gcaaaacagcttattcttgtgggtgaccactgccagcttggtcctgttgtgatgtgtaaa aaggctgcaaaggctggcctgtctcagtctctcttcgagaggcttgtggtgctggggatt cggccaattcgcctacaagtgcagtaccgcatgcatcctgcactgagtgcttttccatcc aatatcttctatgagggttcactccagaatggtgttactgcggcggaccgtgtgaaaaaa ggttttgatttccagtggccacagccagataagccgatgtttttctatgttacacaagga caggaagaaattgccagctcaggcacttcttacttaaacaggacggaagctgccaatgtg gagaagataactacaaagctattgaaagctggtgccaaaccagatcagattggcattatt actccttacgaaggtcaacgatcctatctggtgcagtatatgcagttcagtggttccttg catacgaaactctaccaggaagtggaaattgcaagtgtggatgccttccagggacgtgag aaggactttattatcctttcttgtgtgagggccaatgaacaccaaggaatagggtttctg aatgaccccaggcgtcttaatgtagctcttacaagagcaaggtatggagtaattattgtt gggaacccaaaagcactgtctaaacaaccactttggaatcacctactgaattactacaaa gaacagaaggttctggtggagggaccactgaataacctccgggaaagccttatgcagttc agcaaaccccggaaacttgtcaataccatcaacccaggtgcccgtttcatgactactgcc atgtatgacgcacgcgaggctattattccaggatctgtctatgaccggagcagtcaaggg cgcccatccaacatgtacttccaaacccacgaccagattgggatgatcagtgctggcccc agccatgtcactgctatgaacattcctatccctttcaaccttgtgatgccaccgatgcca ccgccggggtactttggccaggctaacggaccagctgcaggacgtggggcgccaaaagga aagactggtcgtggtgggcgccagaaaaatcgttttgggattcctggaactagtcagtca aaccttccgaatagtcaagcgagccaagatgtggtgtcccagcctttctcccagggtcca ctgactcaggggtatatctccatgagtcagccatcacagatgagtcagcctgggctctcc caaccagaattatcacaggacagttaccttggtgatgagtttaaatctcagattgacgtg gcgctgtcacaggactctacttaccagggtgaacgtgcatatcaacatggtggagtgacg ggactgtcacagtattag

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