Flavobacterium psychrophilum v4-33: IA06_10095
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Entry
IA06_10095 CDS
T03661
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk00300
Lysine biosynthesis
fpk00550
Peptidoglycan biosynthesis
fpk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IA06_10095
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IA06_10095
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpk01011
]
IA06_10095
Enzymes [BR:
fpk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IA06_10095
Peptidoglycan biosynthesis and degradation proteins [BR:
fpk01011
]
Precursor biosynthesis
Amino acid ligase
IA06_10095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
MobB
DUF3440
CbiA
SRP54
Motif
Other DBs
NCBI-ProteinID:
AIG42130
UniProt:
A0A076NR39
LinkDB
All DBs
Position
complement(2174085..2175545)
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AA seq
486 aa
AA seq
DB search
MLLKEILYKVALEVVHGSTDVAVHNIHFDSRKIQSNDVFVAIRGSVSNGHEFIDKAIALG
AKAIVCDTLPTNLLSQITYVKVKDTNAALAYLATNFYDNPSQKLQLVGVTGTNGKTTIAS
LLYQLFKKAGFKVGLLSTVKILVDEIEHKATHTTPDSLTINYYLDKMVEAGCQYCFMEVS
SHGIHQKRTEGLQFVGGVFTNLSHDHLDYHPTFSDYRDVKKSFFDNLPKNAFALSNIDDK
NGAVMMQNTKARKLSYALKTYADYKAIIIENQLSGLLLKINEQEVWVRLIGTFNAYNLLA
IYGVAIELGIEKLEVLRLLSELESVSGRFQFIVSKQNITAIVDYAHTPDALENVLSTIND
IRTRNEQLITIVGCGGDRDKTKRPIMANIASQMSDKAILTSDNPRTENPETIIAEMEAGI
TAVNYKKYMSIIDRKQAIKTACQLAQPNDIILIAGKGHETYQEINGVRHDFDDMQIVKEI
LEQLNK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaaaagaaattttatataaagtcgctctcgaagttgttcacggttcaaccgat
gttgctgtgcataacattcattttgattctcgaaaaatacaatcgaacgatgtttttgtt
gccattcgtggttcggtttcaaacggacatgagtttatagacaaagccattgctcttggg
gcgaaggcgattgtttgcgatactttaccaaccaatttattgtcgcaaattacttatgta
aaagtaaaagacacgaatgcagctttggcatatttagcaacaaatttttatgataatccg
tctcaaaaactacaattagttggtgtcacaggaaccaatggtaaaacaacaattgcgtca
ttattatatcaattattcaaaaaagcaggtttcaaagttggattgctttctactgtaaaa
atattggttgatgaaattgaacacaaagcaacgcataccacgccagattcattaaccatc
aattattatctagataaaatggttgaagctggttgccaatattgctttatggaagttagt
tcgcacggaattcatcaaaaacgtaccgaaggtttacaatttgtaggtggcgtttttaca
aacttatcgcacgaccatttagattatcatccaacattttccgactatcgcgatgtgaag
aaatcattcttcgataatttgcctaaaaacgcatttgctttatcaaatatagatgataaa
aacggtgctgtaatgatgcaaaatactaaggcaagaaaattgtcgtatgccttaaaaacg
tatgccgattataaagccattattatcgaaaatcagttaagcggattgctattaaaaata
aatgaacaagaagtttgggttcgacttattggaaccttcaatgcgtataatttattggcg
atttacggagtagctatcgaattaggaatcgaaaaattagaagttttaagactcttgtca
gaattagaaagtgtttcaggccgttttcagtttattgtatcaaaacaaaatatcactgca
attgtcgattatgcacacacgcccgatgctctagaaaatgtattaagtaccataaatgat
attcgtactcgcaacgaacaactcataacaattgtaggttgtggcggtgatcgtgacaaa
accaaacgcccaataatggcaaatatcgcttcgcaaatgagcgataaagcaattcttact
tcggataatccaagaacggaaaatcctgaaacgattatcgccgaaatggaagccggaatt
acagccgtcaattacaaaaaatatatgtcgattattgacagaaaacaagccataaaaacc
gcttgccagctagcacaacctaacgatattattctcattgcaggaaaaggacatgaaact
tatcaggaaataaatggcgttcgtcatgattttgatgatatgcaaattgtaaaagaaatt
ttagaacaactaaacaaataa
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