Francisella philomiragia O#319-036: LA56_938
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Entry
LA56_938 CDS
T03618
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm00521
Streptomycin biosynthesis
fpm00523
Polyketide sugar unit biosynthesis
fpm00541
O-Antigen nucleotide sugar biosynthesis
fpm01100
Metabolic pathways
fpm01110
Biosynthesis of secondary metabolites
fpm01250
Biosynthesis of nucleotide sugars
Module
fpm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LA56_938 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LA56_938 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LA56_938 (rfbC)
Enzymes [BR:
fpm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LA56_938 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
DUF6370
Motif
Other DBs
NCBI-ProteinID:
AJI54496
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All DBs
Position
complement(952672..953244)
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AA seq
190 aa
AA seq
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MRFTRTHINDIIICEPTVHGDDRGYFVETFRQDKLFDFLGYKINFCQDNESKSSYGVLRG
LHYQLAPHAQTKLVRVIQGRVLDVAVDIRKGSPTFGQYVAVELSAENKKQILVPRGFAHG
FVVLEDDTVFAYKVDNYYAPECDRGIAFDDKSIAIDWQVPVDKLKLSAKDRVQPKLNETV
DLFDYGKSYY
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacacgtacgcatatcaacgatattattatttgtgagccaactgttcacggt
gatgatagaggttattttgtagagacttttcgtcaagataagctctttgatttcttaggc
tataagattaacttttgccaagataatgagtctaagagttcttatggtgtgcttagagga
ttgcattatcagctagctccacatgcacagaccaagcttgttagagtgatccaaggtaga
gtgctcgatgtggcagtagatattcgtaagggtagtcctacttttggtcaatatgtcgcg
gttgaattaagtgctgagaataaaaagcaaatacttgtaccaagaggttttgctcatggt
tttgtggttttagaggatgatactgtatttgcatataaagttgacaattattatgctccc
gagtgtgataggggtattgcttttgatgataagagtatagctatagattggcaagtacct
gttgataagctcaagttgtcagcaaaagatagggttcaaccaaaattaaatgagacagtt
gatttatttgattatggcaagagctattattaa
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