Fusarium poae: FPOAC1_006602
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Entry
FPOAC1_006602 CDS
T09519
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fpoa
Fusarium poae
Pathway
fpoa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fpoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FPOAC1_006602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpoa03400
]
FPOAC1_006602
Enzymes [BR:
fpoa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FPOAC1_006602
DNA repair and recombination proteins [BR:
fpoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FPOAC1_006602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT_2
DNA_ligase_A_C
BRCT
DNA_ligase_IV
LIG3_BRCT
RTT107_BRCT_5
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
68341605
NCBI-ProteinID:
XP_044709790
LinkDB
All DBs
Position
2:7635096..7638106
Genome browser
AA seq
984 aa
AA seq
DB search
MSQTGDAKHEDEIQYGSMGVTREELEEKYPNRPRNHSKTLVFSELFREVFNPLNENKKQN
AAGSGSKKAFRGVNKLSPHEQRRHIVDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYG
LKENTIGKLLVKLMKIDKNSEDGYNLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQ
VGNMTIAEVNEQLDKLAASTGEMENLRVFETFYHRMNSEELMWLIRIVLKQMKVGATEKT
FLDLWHPDGDALFNVSSSLRRVCWELWNPEIRLEQDETGVALMQCFQPQLAQFQMPASFQ
KMIELLRPTEDDPEFWIEEKLDGERMQVHMVQDRSHPGGRRFCFWSRKAKDYTYLYGDGL
QDENSSLTRHLKNAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAAISEQQNKSDTDS
AGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAIKPVHRRLEIHSYTSATSADAIEPL
LREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVIIGGYYGTGKRG
GALSSFMCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWIEWDQRNP
PSEYIELGGGEARQFERPDVWIRPKDSVVVSVKAASVGPSEQFAQGFTLRFPRFRRLRLD
RTWNTALSLEEFQELKQRVDEESKEKAMTVEDRKRRNPKRVKRELTIAGEDTTVAEFMGE
TSKLFEGLEFCVLSEALKPYKKSKTQLETIIKENGGVISQRAAPGTNMVLIGDKKVVKVA
SLIKGGDVDIVRPRWLRDCLEQDLGAFLLPFEDAHLFHATDALRMAASQNTDQFGDSYAR
DLSIEELKQVMDDMPKIEDGIAFDKDEFLQQLEERGKDLGSLRSFTFRRCVVLLHAVEAG
DKRISRLRNLVRFGGGSVTDDANDLSVTHMVIQGDDPMQLGEAADMIRKELSSRPVQPRV
VTGAWIDECWKESTLLDEEQFVIP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaccggtgacgcaaaacatgaagatgaaatccaatatggctccatgggagta
acccgtgaagagttggaggaaaagtatccaaaccgcccaaggaaccactcaaagacactc
gtattttccgagctctttcgagaagtcttcaacccgctcaatgaaaacaaaaagcaaaat
gccgcgggctcaggttccaaaaaggcatttcgtggtgtgaacaagctctctccccacgaa
cagcgccgacacatcgttgaccgtttcattactcgatggcgcaaagaagttggtcctgat
ttctaccctgccttgcgcttaatcctcccagataaggatcgcgaccgtggagtttatggt
ctcaaagagaacactatcggaaaactactcgtcaagctcatgaagattgataaaaactct
gaagatggttacaaccttttgcactggaagttgcccggccagacaatggcatctcgactg
gctggcgattttgctggacgttgtttcgaggttatctcaaaacgaccaatgcgaactcag
gtcggcaacatgacgattgccgaggtgaacgagcagctggataagcttgctgcttccacc
ggagaaatggaaaatctacgtgtgtttgagactttctaccatcgcatgaattccgaagag
cttatgtggctcattcgaatcgtcctcaagcaaatgaaagtcggcgccacagaaaagact
ttcttagatctttggcaccctgatggtgatgctttgttcaacgtatcgtcgagcttgagg
cgtgtatgttgggaactctggaacccagagattcgtcttgaacaggatgagacaggcgtt
gctctgatgcaatgtttccaaccccagcttgctcaattccagatgcctgcgtctttccaa
aagatgatcgaactacttcgaccgaccgaggacgaccctgagttctggatagaggagaaa
ctcgacggtgagcgtatgcaagtgcatatggtccaagacaggagtcacccaggtggtagg
aggttttgtttctggtcacgaaaggctaaagactacacgtatctttacggcgacggtctt
caagacgaaaactcaagtcttaccagacatctcaaaaatgcatttgcatcaggcgtgaag
aacctgattttggatggtgagatgatcacttgggatatgggtgtcgacaagatagtgcct
tttggcaccctcaaaacagccgcaatttccgagcagcaaaacaagtcggatacagactca
gccggtcatcgtcctttatttcgagtctttgacatactctatctgaacaacaagcctcta
acacagtacaccttgagggaccgacatcgagccctggaaaaggccataaaacccgtacat
cgtcgactcgaaatccacagctacactagcgcaacgagtgccgatgctatcgaacctctt
cttcgtgaagttgttgccaatgcttccgagggccttgttttgaagaacccacggtccatg
taccgcctcaatagtcgaaacgatgactggcttaaagtaaagcctgaatacatgtccgag
tttggagagtctctggattgtgtcattatcggtggctactacggcacaggaaaacggggt
ggcgctctatcaagtttcatgtgtgggctacgtgtcacgcagaaccatatacaagctggc
gcgaatcctgaaaagtgcttcagtttcttcaaagtcggtggcggctttcgcgcagaggac
tatgcggagatccgacatcgaacagagggcaaatggatcgaatgggatcaacgaaaccca
ccgtcagagtatatcgagctgggaggaggagaggccaggcaatttgagcgtccagatgtt
tggattcgacctaaagattccgttgtggtttcggtcaaagccgccagtgttggaccttcg
gaacaattcgctcaggggttcactctacgattcccccggttcagacgtcttcgattggac
cgaacttggaatactgctctctcccttgaggaattccaagagttgaaacagcgtgtcgac
gaagaatcgaaggagaaggcgatgacggttgaggacaggaagcgacgcaaccccaaacga
gtcaagagagaactcaccattgctggagaggacacaacagttgccgagttcatgggagag
acgtcaaaactttttgaaggcctggaattttgtgttctttctgaagcactcaaaccatac
aaaaagagcaaaactcagcttgagaccatcatcaaggagaatggcggcgtcatctctcaa
cgagcggcacctggtacgaatatggttcttatcggcgacaaaaaggttgtgaaggtggca
agtcttataaaaggaggagatgtagacatcgtccgccctagatggcttagagattgcctc
gagcaggacttgggcgcgtttcttttgccattcgaggatgcgcatttattccacgcaacc
gatgcgttgagaatggcggctagccaaaacacagatcaattcggcgacagttatgcacgc
gatctctcaatcgaagagcttaaacaagtcatggacgatatgcccaaaatagaagacggc
atagcattcgacaaagatgaattcctgcagcagctcgaggaacgtggcaaagacctaggg
tccttgaggagctttacctttcgacgttgtgtggtgctactacatgccgtggaagctggc
gataaaaggatctcgagactgaggaatctcgtcaggtttggcggaggaagtgtcacggat
gacgcaaacgacttatccgtgactcatatggtgatacaaggtgacgacccaatgcaattg
ggtgaggcagctgatatgatacgcaaggagttgagctcaaggcctgtacagccaagagtg
gtgacaggggcctggatcgatgagtgctggaaagagagcacactgcttgacgaagagcaa
ttcgtgatcccttaa
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