Flavobacterium psychrophilum Z2: AMR72_01115 Help Entry AMR72_01115       CDS       T04556                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism fpsz  Flavobacterium psychrophilum Z2 Pathway fpsz03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:fpsz00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AMR72_01115  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:fpsz03400]     AMR72_01115 Enzymes [BR:fpsz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AMR72_01115 DNA repair and recombination proteins [BR:fpsz03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AMR72_01115 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme DNA_primase_S Motif Other DBs NCBI-ProteinID:  ALM47618 LinkDB All DBs Position complement(250791..253436) Genome browser AA seq 881 aa AA seqDB search MKLSEYNKKRDFKKTAEPKGKVKKSGKELRFVVQKHDASRLHYDWRLEIDGVLVSWAVPK GPIADTTVKRLAMHVEDHPMDYIDFEGTIPKGQYGGGTVMVWDTGTFLAEGSDDVQESEK MLQKMHKEGNIKVVMSGKKLKGSYHLVRMSGKQDEWLLLKGKDEYADKKEFDQDSVLTGR TLEEIESDKKSDVWESNREEKTKHGDDSNILEDDLKSKKALKKETDPTPAFTAEDVANAK PLKTFPKDWKPQLATLADEIFDNDEWIFETKYDGYRSLIQINKGKVDLVSRNGISFNNKY AQLVKSFGVIKDNMILDGEIVVEDNKGNSRFQWLQYFQDNPDQGKLKCYVFDILYFNGYD LTSLKLLQRKRILEALLPQADDILYSEHIIGKGAKALAKAEKDGGEGLIAKKISSTYHVN KRSKEWLKIKITKEQEMVIGGYTEPKGSRTGFGSLLLGYYEDGKFIYSGKVGTGFNEESL KEMYLKLTKLESKTSYFEIKPKERGAHWIKPELVAQIKYSEWTETGSLRHPVFIALRTDK KPKDVTREKAIATDKIVPEEKATQDIKKAKSTIVKKENVSAKTTTRGFDTEKVEVSNPDK MFWPTEGYTKGDVIAYYDEMADYVLHYIKDRPQSMRRNPDGIKNEGFFQKDMAGKAPSWA KTRKIKSSSKGESVEYLICNDKETLIYMANLGCIEINPWSSRVGSINNPDYIIFDLDPNK ASLKDLVTTAKKVKEILDSLSIKGYLKTSGGKGLHVFIPIQPKYTYDQTRDFSHIISEAV HKALPKITSLERSPAKRIGKVYLDFLQNGKGKTMACAYSLRPREGATASAPLEWDELDNK FDLKNYNIKTLPKRVKEKGDLWKNFFDDAIDLKAVLDKLSE NT seq 2646 nt NT seq  +upstreamnt  +downstreamnt atgaagttatctgaatataataagaaaagagattttaagaagactgccgagcctaaagga aaggtgaaaaagtcaggcaaggaacttcgctttgttgttcagaagcatgatgcatcccga ttgcattacgattggcgtttagaaattgatggtgttttagtgagctgggcggttcctaaa gggccgatagccgatacaacagttaaacgcctggcgatgcatgttgaagatcaccctatg gattatattgattttgaaggcactataccaaaagggcaatatggtggtggtactgttatg gtttgggatacaggtacttttttagctgaaggaagtgatgatgttcaggaaagtgaaaag atgctgcagaagatgcataaagaagggaacatcaaggttgtgatgagtggtaaaaagcta aaaggctcttaccatctcgtacgaatgagcggtaaacaggatgaatggctattgcttaaa ggaaaagatgaatatgcagataaaaaagaattcgatcaggattcggtattaacagggcgt acgctggaagaaattgaaagtgataaaaaatcggatgtttgggaaagtaacagagaagaa aaaaccaaacatggcgatgacagtaacatactggaagatgatttgaaaagtaagaaggct ttaaagaaggaaaccgaccctactcctgcttttactgctgaagatgtcgccaatgcaaaa ccgcttaaaacttttccaaaagattggaaaccacaattggccactttggcggacgaaata tttgataatgatgaatggatatttgaaaccaaatatgatgggtatcgttcgcttatacaa ataaacaaaggtaaagtagatcttgtttcgcgaaatggtatatcattcaataataagtat gcacagcttgtaaagtcatttggggttattaaagataacatgatactggatggcgaaatt gttgttgaggacaataaaggcaatagtcgttttcagtggctgcaatactttcaggataat ccggatcagggcaaattaaagtgttacgtgtttgatattctttatttcaacggctacgac ctgacttcactcaaattacttcagcgtaaacgaattctggaagcgctattgccccaagca gatgatatactatattcagaacatataatcggaaaaggcgcgaaggcacttgcaaaagca gaaaaggatggtggtgaaggacttattgctaaaaaaatatcgtctacctaccatgtaaac aaacgatctaaagaatggcttaaaattaaaataactaaagaacaggaaatggttattggc ggctatactgaacctaaaggttcacgtacaggctttggctcgctccttcttggctattat gaagatggtaagtttatatattcaggtaaagtaggtacaggcttcaacgaagaatcattg aaagaaatgtacctaaagcttactaagctggaaagtaagacatcttacttcgaaatcaaa cctaaagaacgtggcgcacactggattaaacctgaacttgtcgcccagataaaatattct gagtggactgaaactggaagcctgcgtcaccctgtttttattgcattgcgaacagataag aaaccaaaagatgttacaagggaaaaagctatagcaaccgataaaatcgtacccgaagaa aaagcgactcaagacattaaaaaagctaaatctaccattgtgaaaaaagagaatgtttca gcaaagacgacgactaggggttttgacaccgaaaaagttgaagtatccaatcctgataaa atgttctggcctacagaaggctatactaaaggtgatgttatagcgtattatgatgaaatg gcagattatgtacttcattatataaaggacaggccacaatcaatgcgccgtaatcccgat ggtataaaaaatgaaggtttctttcagaaagatatggctggaaaagcaccatcctgggca aagacccgaaaaattaaatcttcatcaaaaggtgaatctgttgaatatctaatatgtaat gataaagaaacactcatttatatggcaaacctgggatgcattgaaataaatccctggagt agccgtgttggaagtataaataatcccgactatattattttcgaccttgacccaaataaa gcttcactaaaagatcttgttactacagctaaaaaagtaaaagaaattttagacagcctg agcataaaaggttacttaaaaacctcggggggtaaaggattgcatgtgttcatcccgata cagcctaagtatacgtacgaccaaacaagggatttctctcacattattagcgaagccgta cacaaagcactacctaaaataaccagtcttgagcgcagtcctgcaaaacgtattggcaaa gtttatttagattttttacagaatggtaaaggcaaaaccatggcctgtgcttattctctc cgtccacgggaaggcgctacagctagcgctccactagagtgggacgaactggataataaa ttcgacctgaaaaattacaacattaagacattgccaaagagggtcaaagaaaaaggtgat ctttggaaaaacttctttgatgatgcaatcgatctcaaggcagtacttgataaactaagt gaataa

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