Fusarium pseudograminearum: FPSE_02729
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Entry
FPSE_02729 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FPSE_02729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_02729
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FPSE_02729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
WDR54
RMC1_N
Nup160
eIF2A
DIKK1-2-4_C-subdom1
Motif
Other DBs
NCBI-GeneID:
20361348
NCBI-ProteinID:
XP_009254123
UniProt:
K3W260
LinkDB
All DBs
Position
4:2306851..2309784
Genome browser
AA seq
960 aa
AA seq
DB search
MVKSYLKYEHGKSFGVVASSTSNLVWSSKDRTGTGAGQAIVAANEEVLCWDIKKGELISR
WRDERCTVPVTAIAQSKADKDVFAVGYEDGSIRLWDSKISSVILNFNGHKSAITKLVFDK
SGVRLASGSRDTDIIMWDLVAEVGQFKLRGHKDQITGLQFVEPEAQVQDEDGSRAMVIDG
EGTHEGFLLTTGKDSLIKLWDLSSRHCIETHISQTNGECWALGLSPDYSGCVTAGNDGEI
KVWSLDADGLALSTRQVDTPAAAQYLQDKGTLHRQSKDRATEVVFHPKKDYFAVHGSEKA
VDVWRLRSEAEIKKALARKRRRRREKAKDGKAAEEETNGEEPEDVSKADVSDVFVQHVIV
RTGGKVRSVDWAVPSGQKDLQLLVGTTNNLLEYYSVSRKDKSDKSKKEDAPEYTRALSVE
LPGHRTDIRALSLSSDDKMLASASNGNLKIWNVKTTACIRTFECGYALCCAFLPGDKVVV
VGTKSGELQLFDVASAALLDSVDAHEKAIWSLSVHPNGQSVVSGSADQTAKFWDFKIVQE
EVLGTRRTTPKLKLVQSRTLKVSHDILSLKFSPDAKLLAVALFDSTVKVFFVDSLKLYLN
LYGHKLPVLSMDISYDSKMIVTSSADKNIRIWGLDFGDCHKALYGHKDSILQVAFVPHNN
DGNGHHFFSSSKDRTIRYWDGDKFEQIQRMDGHHGEVWAIAVSHSGNLLVSAGHDKSIRI
WDETDEQIFLEEEREKEMEELYESTLTTSLERDADAQDENNEVGAASKQTSETLMAGERI
AEALEMGMADLNLLKEYEEAKLTNPHAQPPQRNMVFLALGNITAEAYVLSVLQKIKASAL
HDALLVLPFSSVPVLFTFLNIFAMRSMNMPLTCRILFFMLKTHHKQIVASRSMKVMLDGI
RINLRASLKRQKDEMGVNIAALKVVGMQIRDKSIKDYVDENWEEENDARSAKKRTFVDVA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtcatacttaaaatacgagcatggcaagtccttcggtgttgtcgcctcgtcg
acttcgaacctggtatggtcgtccaaagaccgaacgggaaccggcgcaggacaggcgatc
gtcgccgcgaacgaggaggttctctgctgggatattaaaaagggcgagctgatcagccgc
tggagagatgagcgatgcacggtgcctgtgactgcgatcgcgcaaagcaaagccgacaag
gatgtattcgctgtcggatacgaggacggcagcattcgactttgggacagcaagatttcc
tccgttatactcaacttcaatggacacaagtcggcaatcacaaaacttgtattcgataag
tccggcgtcagacttgccagtggatctcgggatacggacatcatcatgtgggaccttgtt
gcagaagttggtcaattcaagctgcgaggacacaaggaccaaatcaccggccttcagttt
gttgagccggaggcccaggtgcaggacgaggacggctcgcgtgccatggttatcgatggc
gaaggaacacacgaaggcttcctcttgacgactggcaaagactcgctcatcaaactctgg
gatctctcgtcaagacactgcatagagactcacatttcgcaaaccaacggcgaatgctgg
gctcttggtctttctccagactacagcggatgtgtcacagctggaaacgatggcgaaatc
aaagtttggtcattggatgccgatggtcttgcgctcagcacccgccaggtggacacaccc
gccgcagcccaatatctccaggacaaaggaacacttcacaggcaaagcaaggacagggca
accgaggttgtatttcaccccaagaaagattactttgctgttcacggttcagaaaaggcg
gtcgacgtgtggcgactacgatccgaggccgagataaaaaaggctctagcacgtaagcga
agaagacgtcgcgagaaggccaaggacggcaaggccgccgaggaggaaaccaacggcgaa
gagcccgaggacgtctcaaaggccgatgtcagtgatgtgtttgttcagcacgtcattgtg
cgaacaggaggaaaggttcgctctgttgactgggctgtacccagcggacagaaagatctt
caattgctagtaggaaccacaaacaacttgctcgagtactacagcgtctcacgcaaagac
aagagcgacaagtcaaagaaggaagacgctcccgaatacacaagggctctgtccgtcgag
ctgcccggtcaccgaacggacattcgggccctttcgctaagctcggatgacaagatgctg
gcgtctgcttccaacggcaacttgaaaatttggaacgtgaaaaccactgcttgcattcga
acattcgagtgtggatacgcgctttgttgtgctttccttcctggagacaaagtcgtggtt
gttggcaccaagagcggcgagttgcagctcttcgacgtcgcttcagcggctctccttgac
agtgtcgatgctcacgagaaagccatttggtcgctgagcgtccaccccaacggtcagtct
gttgtttctggcagcgctgaccagacagccaagttctgggacttcaagattgtgcaggag
gaggttctgggtacaaggagaacaacaccaaagctcaagttggtgcaatcaaggacattg
aaggtttctcatgatattctcagcctcaagttctcaccggatgccaagcttctggctgtt
gccctattcgatagcacagtcaaggtcttctttgtcgattccctcaagctttacctcaac
ctctacggtcataagctcccagtgctgagtatggacatatcatacgatagcaagatgatt
gtcacaagttcggccgacaagaacatcagaatatggggtcttgattttggtgattgtcat
aaagccctgtatggccacaaggacagtattctgcaggtcgcctttgtgccacataacaac
gacggcaatggccaccacttcttcagtagcagtaaggatcgcacgatccgatactgggat
ggcgataagtttgagcaaatccaaaggatggatgggcaccacggagaagtatgggcaatt
gctgtttcccacagcggcaaccttttggttagtgccggccacgacaagagtattcggatt
tgggatgagactgatgaacaaatcttcctcgaggaagagcgtgagaaggagatggaggag
ctgtatgagagtacccttaccacgtctctggaacgtgatgcggacgcccaggacgagaac
aacgaggtcggcgcggcgagcaagcagacttcagaaactctcatggctggtgaacgaata
gccgaagcgctggagatgggcatggctgacttgaacctccttaaggagtacgaggaagcc
aaactcacaaacccacatgctcaacccccccagcgcaatatggtattccttgctcttggc
aacatcactgctgaagcctacgtcctctccgtcctacagaaaatcaaggcctcagcacta
cacgatgccctcctggtcctacccttctcatccgtccccgtcctcttcactttcctcaac
atatttgccatgcggtccatgaacatgcctctgacatgccgtattctgttcttcatgctc
aagacacatcacaagcaaattgttgctagccgtagcatgaaggtcatgctcgacggcatc
cgcattaacctccgcgcttcgctcaagcgccagaaggacgagatgggagtcaacattgct
gccctcaaggttgtcggtatgcagattcgcgacaagagcatcaaggactacgtggatgag
aactgggaggaggagaacgacgcaaggagtgccaagaagaggacgtttgttgacgttgct
taa
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