Fusarium pseudograminearum: FPSE_02970
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Entry
FPSE_02970 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03022
Basal transcription factors
fpu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPSE_02970
09124 Replication and repair
03420 Nucleotide excision repair
FPSE_02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpu03021
]
FPSE_02970
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_02970
Transcription machinery [BR:
fpu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPSE_02970
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPSE_02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
20361589
NCBI-ProteinID:
XP_009254364
UniProt:
K3VPG5
LinkDB
All DBs
Position
3:complement(4049477..4050940)
Genome browser
AA seq
469 aa
AA seq
DB search
MADSDGEYVGDMSDDDLMDHRVSNDNPQAPKGKSSKSRKGDSARAWEVSKRTWETGLPEE
DQDGVLSINVLEAEKRKRLLRDTTPLQRGIIRHMVLVLDMSFAMIEKDLLPTRYRLMLSY
AVAFVREFFEQNPISQLGIIGMRDGVAVRVSDVGGNPAEHLDKLKGLESQDPQGNPSLQN
ALEMCRGALFHAPSHGTREVFIIYGALLSSDPGDIHETIGNLITDRIRVSIVGLSAHLAI
CADLCSRTNAGDGSQYNIAMDEVHFRELFLAATTPPVTRTVEQSTASLLMMGFPSRTLVP
NGTTSYCACHNRPCREGYLCTRCGARVCRIPSECPSCDLTLILSTHLARSYHHLFPLRNW
IEVPWAKATTSAGCFSCLAPFPEPPKNKGHDKSKEDSGAPKTAKGVSESGRYACEVCGQH
FCIDCDVFAHEIVHNCPGCQSLISKTDGAAISGEHKGTAAHTNGDVAMT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgactccgacggcgagtatgtcggcgacatgtcggacgacgacctcatggaccat
cgcgtctccaacgacaatccccaagcaccgaaaggcaaatcctcaaaatcgagaaaaggc
gactcagctagagcttgggaagtctcgaagcggacttgggagacgggtctaccagaggag
gatcaagacggcgtcctgagtatcaacgtactcgaagccgagaagcgaaagcgactacta
cgcgacacaacaccgctacagagaggaatcattcggcatatggtgcttgtgctggacatg
tcgtttgctatgatagaaaaggaccttctaccgacgagataccgccttatgctgagctat
gcggttgcttttgtacgggagttctttgagcagaaccccatttcgcagctaggtattatt
ggcatgcgcgatggtgttgctgtcagagtcagcgacgtgggaggaaacccagcggaacat
ttagataagctaaagggattggagagtcaagatcctcaaggaaacccaagtttgcagaac
gctctcgagatgtgtcgaggagctctattccatgcgccctcccacggtacgcgagaagtt
tttattatctacggcgccctattatcgagcgaccctggcgatatccacgagaccatcggc
aacctcatcacagaccgaatacgcgtttccattgtcggattgtccgcccatctggccatc
tgcgcagatctctgctcacggacaaatgccggcgatgggtcacaatacaatatcgcaatg
gacgaggttcacttccgcgaactcttcctcgcagccacaacgcccccagtgacgcgcacg
gttgagcagagcacagccagcctgctcatgatggggttcccatcccggacgcttgttcca
aacgggacgacgagttactgcgcctgtcacaatcggccttgccgcgaaggttatctctgc
acccgttgcggcgctcgcgtgtgccgtatcccctctgagtgcccatcgtgcgatcttacg
cttattctgtccacgcatctggcccgatcataccaccatttgtttccgctaaggaactgg
atcgaagtaccttgggccaaagccaccacctcagcaggctgtttttcatgtcttgcgccc
tttcctgagccaccgaagaacaaagggcacgacaagtccaaggaagacagtggcgcgcca
aagacagccaaaggcgtcagcgagagcggccgctatgcatgtgaggtttgcggacaacac
ttttgcatcgactgtgatgtctttgcccatgagatcgtccacaactgtccaggttgccaa
agtttaatatcaaagactgatggtgctgccatatcgggtgaacataaaggtacggctgcg
cataccaacggcgatgttgccatgacatga
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