Frankia casuarinae: Francci3_4184
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Entry
Francci3_4184 CDS
T00320
Name
(GenBank) WD-40 repeat-containing protein
Organism
fra
Frankia casuarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40
ANAPC4_WD40
NBCH_WD40
AAA_16
RMC1_N
Cytochrom_D1
AAA_29
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABD13532
RhizoBase:
Francci3_4184
UniProt:
Q2J5B0
LinkDB
All DBs
Position
4988440..4993413
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AA seq
1657 aa
AA seq
DB search
MATASALSSALSLTAQMMRPRPERPDMGGLLIAQRQRTGTVRLSRAPRITFGFRGIPPGR
RRIDLWLMRQLDDLVGGIWPLMSGTGGRARAVARSSTSRTSRLVLGSAGARVLVVGTGGL
GGPGVDRAGEVGAVVARAVAAVGGVFVERCGLAEESLRTVVDPATPLDLGEALAAAVEQA
TEALLVYYAGIVLVDADGMIHLATAVSDSRPHRLAYTALPLSSVLATMATSRAATRLIAV
DGLWVRTTVANSTVPPVPPRVPGLREDVPGPREDAGGGVNAAGDGVELLVLTSPLAAHTG
PAADDGPPLSAGLVRLLVNGDPDGPVELSVGQVTRRLAQRLTAAGNAVLHSAAAWSDGVI
LAGNAAHTPPIADLEPAPTTVLTDGPGPVVTPTPRQPAGLPSAPDGGGTTGEAACPYPGL
ASFDAGTQRWFFGRERATAEALSRLEERLDGAGPLVLVGASGSGKSSLLGAGLLPALARG
AVAGARGWPQVLMTPTDHPARELARTVAQAAGLSVLAAARLDVVSQPARFVGALSDLLAL
GPAAAGGGTTPPTRRVVIVVDQFEETFTLCADEEERGAFIRALVAACRGDGATRPPAVVV
IGVRADFYGWCAAYPELVDALQTGQVVVGPMTAAEVRDAIVKPAEAVGLTVEPGLVDLML
HDIGADEHGVVADPGSLPLLAHALRATWRERENGTLTVAGYLRAGGLRGAIARTAEETFG
TLDAAGQDAAWQILLQMIQFGDGTDDTRRRVSRTELLSTSASAQNSASAQNSASAQNSAS
AQNSASAQNVSAVLDALVAARLVTVDADTVEISHEALLRSWPRLREWIEVDRAAAVTRQR
LTDAAATWDDGGRDPSYLFAGSRLATVREWAQAGQRQTALSPVARDFLAASLAAEQAARR
AEVRRTRRLHQLVAALTVLTLIAGGAMAFAFRQRAQIAGERDRALSVAIGRQADQLRRSD
PLAAAQLGAVAYRLAPTAEARSAVLSTFASDYGFATRHLGTQTRPIGAVAYSRDGRLVAT
ASDDWTVALWSASDPTRRTPLSTIRGHRLAVKSVAFSPDGRFVATGSDDRTVRLWTITDP
THPVLAATLPGASDSIHGLAFRSDSRVLATGGYGSQVRLWDVSDVSAIRPAGAITAHTAN
VRAVAFSPDGTELLTGGDDGRALLWDVRDLAAPAELSELKGEAGPNVVLSANTAVRAVAI
SPDGKTAVTGSDDTTARVFDLTDPRRPTTLQVIDEVRSVEAVAVNVDGLVAVGVNSAVEI
YDPSRHFDAIAVLPHASKPWALAFSPDGRTLASGADDRTLRLWDVPGPVLVGHHRFLWST
AVHPNGRVLATGDYGQTVRLWDAHDPDRPLPAATLTGFNAAVGSVRFTPNGRVLIAGSLD
YATDFDGMVTLWDVADIHRPRLLSTIHPGIGGIKDLEVSPDGRTLALAGTSARLALVDIS
APATPRGRSVLAGHRYDVATVSFSPDGRTLASGSSDRTIRLWDITTPDRPAGISTITGFT
SALITIAFSRDGRTLAVGSFDTKVALWDVTDRRAPRALPSIIGLGAGVNSIEFSSDGRLM
AAGVGGANGVVRLWDMSDPADPVPYATFSGRYNGFAAVAFAPDTAFIVGAPYQVIGFVWD
LDPASVVTRLCARAGDPLTREEWKQYLPGLDYDPPCG
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccgcatctgcgctcagctccgcgctctcgctcaccgcgcagatgatgcgacct
cgcccggaacggccggacatggggggcttgctcatagcacagcgacaacgcactggcacg
gtcagactcagccgcgccccgaggataacgttcgggttccgcggcattccgcccgggcgc
cgtcggattgatctatggttgatgcgccagctggatgacctggtcgggggcatctggccg
cttatgtcgggcacggggggcagggcgagagctgtggctcgttcatcgacgtcgcggacg
tcgcggttggttctgggatccgccggtgcgcgggttctcgtcgtcggcacgggcgggctc
ggtgggcccggcgtcgaccgggcgggcgaggtcggcgccgtggtagcgcgggccgtggcc
gcggtcggcggcgtgttcgtggagcgctgcgggctggccgaggaaagcctgcgcacggtc
gtcgacccggcgaccccgctcgatctcggcgaggctctcgcggcggccgtcgagcaggcc
accgaggctctcctcgtctactacgccggcatcgtcctcgtcgacgccgacgggatgatc
catctggcgacggccgtgtcggacagccgtccccatcgcctggcctacacggccctgccg
ttgtcgtcggtcctggcgacgatggcgacgagccgggccgccacccggctcatcgccgtc
gacggtctgtgggtgcggaccacggtcgccaactccaccgtcccgccggtgccacctcgc
gttcccggtcttcgcgaggatgttcccggtcctcgtgaagatgcggggggcggcgtcaac
gcggccggcgacggcgtggagctgctcgtgctgacctcgccgctggccgcgcacaccggg
ccggccgcggatgacggaccgccgctgtccgccggcctggtccggctcctcgtcaacggc
gacccggacggcccggtcgagctgagcgtcgggcaggtgacccggcggctcgcccaacgt
ctcaccgcggccgggaacgcagtgctgcattccgccgccgcctggtcggatggggtgatc
ctcgccggcaacgccgcgcacaccccgccgatcgccgacctggagccggcgccgaccacc
gtgctcaccgacggccccggcccggtggtgactccaaccccgcgacagccggcggggctt
cccagcgcaccggacggcggggggaccaccggtgaggccgcctgcccctatcccggtctc
gcctcgttcgacgccggcacgcagcgctggttcttcgggcgggagcgagcgacggccgag
gcgctgtcgcggctggaggaacggctggacggcgcgggtccgctggtgctcgtcggtgcc
tccggctcgggaaagtcgtcgctgctgggcgccgggctgctcccggcgctcgcccggggc
gcagtggcgggcgcccgcggttggccgcaggtcctgatgacacccacggatcacccggcc
cgcgagctggcccgcacggtggcgcaggcggccgggctgtccgtgctcgcggcggcacgg
ctcgacgtcgtctcgcaacccgcccgtttcgtcggggcgctgtcggatctgctcgccctg
ggtccggccgccgccggcggcgggaccaccccgccgacccggcgggtggtgatcgtcgtc
gaccagttcgaggagacgttcaccctgtgcgcggatgaggaggagcgcggcgcgttcatc
cgcgcgctggtcgccgcgtgccgcggggacggggccacccgtccaccggcggtcgtcgtc
atcggcgtccgcgccgacttctatggctggtgcgcggcctatccggagctggtggacgcg
ctccagacggggcaggtcgtggtcgggccgatgaccgcggcggaggtgcgcgacgccatc
gtgaagccggccgaggcggtagggctcacggtggagccgggcctggtcgatctgatgctg
cacgacatcggcgccgacgagcacggcgtcgtcgccgaccccggatcgttgcccctgctc
gcgcacgcgctgcgcgccacctggcgggaacgcgagaacggcactctgacggtggccggt
tacctgcgggccgggggtctacggggggccatcgcccggacggcggaggagaccttcggc
acgctggacgcggccggccaggatgcggcctggcagatcctgctacagatgatccagttc
ggggatgggacggacgacacccgccgccgcgtctcacgcaccgagctgctgtccacgtcg
gcgtcagcccagaactcggcgtcagcccagaactcggcgtcagcccagaactcggcgtca
gcccagaactcggcgtcagcccagaacgtctccgccgtcctcgacgcgctggtcgccgcc
cgactcgtcaccgtggacgccgacaccgtcgagatctcccacgaggcgctgctgcgctcg
tggccgcggctgcgcgagtggatcgaggtcgatcgtgccgcggcggtgacccgacagcgg
ctcaccgacgccgcggccacctgggacgacggcgggcgggacccgtcctacctgttcgcc
ggcagtcggctggcgaccgtccgggagtgggcgcaggccgggcagcggcagacggcactg
agcccggtcgcgcgggactttctggcggcctccctcgcggccgagcaggcggcgcggcgg
gccgaggtccggcggaccaggcggctgcaccagctcgtcgccgctctcacggtgctgacc
ctgatcgccggtggagcgatggcgttcgccttccggcaacgggcccagatcgccggcgag
cgggaccgggcgctgtcggtggcgatcggccggcaggccgaccagctacgcaggtccgac
ccgctggccgccgcccagctcggcgccgtcgcctaccgcctggcgccgacggcggaggcg
cgcagcgccgtgctgtcgacgttcgcgagcgactacggcttcgccacccgtcacctcggc
acgcagacccgtccgatcggcgcggtcgcctacagccgggacggcaggctggtggcgacg
gcgagcgacgactggacggtcgccctgtggtccgcgtcagaccccacccgccgcaccccg
ctcagcacgatcaggggccaccggctggcggtgaaatccgtggcgttcagcccggacggc
cggttcgtcgccaccgggagcgacgaccggacggtccggctgtggaccatcaccgatccc
actcacccggtgctcgcggcgacgttacccggcgcctccgactcgatccacgggctggcc
ttccgctccgacagccgggtccttgccaccggcgggtacggatcacaggtgcggctgtgg
gacgtctccgacgtgagcgcgatccggccggccggcgcgatcaccgcccacaccgcgaac
gtccgtgccgtcgcgttcagtcccgacggcaccgagctgctgaccggtggcgacgacggc
cgggccctgctgtgggacgtgcgggacctcgccgccccggcggagctgagcgagctgaag
ggcgaggcgggcccgaatgtcgtgctcagcgcgaacacggccgtccgtgcggtcgccatc
agcccggacgggaagacggcggtgaccggcagcgacgacaccaccgcgcgggtcttcgat
ctcaccgacccgcgacggccgaccaccctccaggtcatcgacgaggtgcgatcggtcgag
gcggtggcggtcaacgtggacggcctcgtggccgtgggggtgaacagcgcggtcgagatc
tacgatccgtcccgccatttcgacgccatcgcggtcctgccgcacgcgtcgaagccgtgg
gcgttggccttcagcccggacgggcgaaccctcgcctccggtgccgacgaccgcaccctg
cgcctgtgggacgtgccggggccggtgctggtcgggcaccaccgcttcctgtggtcgacg
gcggtccatccgaacgggcgggtcctagccaccggggactacgggcagaccgtccggctg
tgggatgcgcatgaccccgatcggccgctaccggccgccacgttgaccggattcaacgcc
gcggtcggcagcgtccggttcaccccgaacggcagggtcctcatcgccggcagcctcgac
tacgccaccgacttcgacggcatggtcacgctgtgggacgtcgccgacatccaccgtccc
aggctgctgtccaccatccatcccggcatcggcgggatcaaggacctggaggtcagcccg
gacggccggaccctcgcgctggccggcacgagcgcccggctggccctggtggacatctcc
gccccggccacgccccgggggcggtccgtcctcgcagggcaccgctacgacgtcgccacc
gtcagtttcagcccggacgggcgcaccctggcgtccggaagcagcgaccggaccatccgg
ttgtgggacatcacgacaccggaccgaccggcgggcatcagcacgatcacgggcttcacc
agcgccctgatcaccatcgccttcagccgggacggaaggaccctcgccgtcggcagcttc
gacacgaaggtcgccctgtgggacgtcacggaccgccgggccccccgcgcgctgccctcg
atcatcgggttgggggccggcgtcaactccatcgaattcagctccgacggccggctcatg
gcggcgggcgtcggcggcgcgaacggcgtggtgcggctgtgggacatgtccgatccggcc
gacccggtgccgtacgccaccttcagcggccgctacaacggcttcgctgcggtcgccttc
gccccggacaccgccttcatcgtcggagcgccctaccaggtgatcggattcgtctgggac
ctcgacccggcgagcgtcgtcacgcggctgtgcgcgcgggccggcgacccgctcacccgc
gaggaatggaaacagtacctgccgggcctcgactacgatccgccgtgcggctga
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