KEGG   Frankia casuarinae: Francci3_4184
Entry
Francci3_4184     CDS       T00320                                 
Name
(GenBank) WD-40 repeat-containing protein
Organism
fra  Frankia casuarinae
SSDB
Motif
Pfam: nSTAND1 WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st WDR55 Beta-prop_CAF1B_HIR1 EIF3I CFAP251_N Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th DSE1_N Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR19_1st Tricorn_2nd RMC1_N AAA_16 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Vps41 Cytochrom_D1 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 DNAI3_WD AAA_29 RsgA_GTPase AAA_22
Other DBs
NCBI-ProteinID: ABD13532
UniProt: Q2J5B0
LinkDB
Position
4988440..4993413
AA seq 1657 aa
MATASALSSALSLTAQMMRPRPERPDMGGLLIAQRQRTGTVRLSRAPRITFGFRGIPPGR
RRIDLWLMRQLDDLVGGIWPLMSGTGGRARAVARSSTSRTSRLVLGSAGARVLVVGTGGL
GGPGVDRAGEVGAVVARAVAAVGGVFVERCGLAEESLRTVVDPATPLDLGEALAAAVEQA
TEALLVYYAGIVLVDADGMIHLATAVSDSRPHRLAYTALPLSSVLATMATSRAATRLIAV
DGLWVRTTVANSTVPPVPPRVPGLREDVPGPREDAGGGVNAAGDGVELLVLTSPLAAHTG
PAADDGPPLSAGLVRLLVNGDPDGPVELSVGQVTRRLAQRLTAAGNAVLHSAAAWSDGVI
LAGNAAHTPPIADLEPAPTTVLTDGPGPVVTPTPRQPAGLPSAPDGGGTTGEAACPYPGL
ASFDAGTQRWFFGRERATAEALSRLEERLDGAGPLVLVGASGSGKSSLLGAGLLPALARG
AVAGARGWPQVLMTPTDHPARELARTVAQAAGLSVLAAARLDVVSQPARFVGALSDLLAL
GPAAAGGGTTPPTRRVVIVVDQFEETFTLCADEEERGAFIRALVAACRGDGATRPPAVVV
IGVRADFYGWCAAYPELVDALQTGQVVVGPMTAAEVRDAIVKPAEAVGLTVEPGLVDLML
HDIGADEHGVVADPGSLPLLAHALRATWRERENGTLTVAGYLRAGGLRGAIARTAEETFG
TLDAAGQDAAWQILLQMIQFGDGTDDTRRRVSRTELLSTSASAQNSASAQNSASAQNSAS
AQNSASAQNVSAVLDALVAARLVTVDADTVEISHEALLRSWPRLREWIEVDRAAAVTRQR
LTDAAATWDDGGRDPSYLFAGSRLATVREWAQAGQRQTALSPVARDFLAASLAAEQAARR
AEVRRTRRLHQLVAALTVLTLIAGGAMAFAFRQRAQIAGERDRALSVAIGRQADQLRRSD
PLAAAQLGAVAYRLAPTAEARSAVLSTFASDYGFATRHLGTQTRPIGAVAYSRDGRLVAT
ASDDWTVALWSASDPTRRTPLSTIRGHRLAVKSVAFSPDGRFVATGSDDRTVRLWTITDP
THPVLAATLPGASDSIHGLAFRSDSRVLATGGYGSQVRLWDVSDVSAIRPAGAITAHTAN
VRAVAFSPDGTELLTGGDDGRALLWDVRDLAAPAELSELKGEAGPNVVLSANTAVRAVAI
SPDGKTAVTGSDDTTARVFDLTDPRRPTTLQVIDEVRSVEAVAVNVDGLVAVGVNSAVEI
YDPSRHFDAIAVLPHASKPWALAFSPDGRTLASGADDRTLRLWDVPGPVLVGHHRFLWST
AVHPNGRVLATGDYGQTVRLWDAHDPDRPLPAATLTGFNAAVGSVRFTPNGRVLIAGSLD
YATDFDGMVTLWDVADIHRPRLLSTIHPGIGGIKDLEVSPDGRTLALAGTSARLALVDIS
APATPRGRSVLAGHRYDVATVSFSPDGRTLASGSSDRTIRLWDITTPDRPAGISTITGFT
SALITIAFSRDGRTLAVGSFDTKVALWDVTDRRAPRALPSIIGLGAGVNSIEFSSDGRLM
AAGVGGANGVVRLWDMSDPADPVPYATFSGRYNGFAAVAFAPDTAFIVGAPYQVIGFVWD
LDPASVVTRLCARAGDPLTREEWKQYLPGLDYDPPCG
NT seq 4974 nt   +upstreamnt  +downstreamnt
gtggcgaccgcatctgcgctcagctccgcgctctcgctcaccgcgcagatgatgcgacct
cgcccggaacggccggacatggggggcttgctcatagcacagcgacaacgcactggcacg
gtcagactcagccgcgccccgaggataacgttcgggttccgcggcattccgcccgggcgc
cgtcggattgatctatggttgatgcgccagctggatgacctggtcgggggcatctggccg
cttatgtcgggcacggggggcagggcgagagctgtggctcgttcatcgacgtcgcggacg
tcgcggttggttctgggatccgccggtgcgcgggttctcgtcgtcggcacgggcgggctc
ggtgggcccggcgtcgaccgggcgggcgaggtcggcgccgtggtagcgcgggccgtggcc
gcggtcggcggcgtgttcgtggagcgctgcgggctggccgaggaaagcctgcgcacggtc
gtcgacccggcgaccccgctcgatctcggcgaggctctcgcggcggccgtcgagcaggcc
accgaggctctcctcgtctactacgccggcatcgtcctcgtcgacgccgacgggatgatc
catctggcgacggccgtgtcggacagccgtccccatcgcctggcctacacggccctgccg
ttgtcgtcggtcctggcgacgatggcgacgagccgggccgccacccggctcatcgccgtc
gacggtctgtgggtgcggaccacggtcgccaactccaccgtcccgccggtgccacctcgc
gttcccggtcttcgcgaggatgttcccggtcctcgtgaagatgcggggggcggcgtcaac
gcggccggcgacggcgtggagctgctcgtgctgacctcgccgctggccgcgcacaccggg
ccggccgcggatgacggaccgccgctgtccgccggcctggtccggctcctcgtcaacggc
gacccggacggcccggtcgagctgagcgtcgggcaggtgacccggcggctcgcccaacgt
ctcaccgcggccgggaacgcagtgctgcattccgccgccgcctggtcggatggggtgatc
ctcgccggcaacgccgcgcacaccccgccgatcgccgacctggagccggcgccgaccacc
gtgctcaccgacggccccggcccggtggtgactccaaccccgcgacagccggcggggctt
cccagcgcaccggacggcggggggaccaccggtgaggccgcctgcccctatcccggtctc
gcctcgttcgacgccggcacgcagcgctggttcttcgggcgggagcgagcgacggccgag
gcgctgtcgcggctggaggaacggctggacggcgcgggtccgctggtgctcgtcggtgcc
tccggctcgggaaagtcgtcgctgctgggcgccgggctgctcccggcgctcgcccggggc
gcagtggcgggcgcccgcggttggccgcaggtcctgatgacacccacggatcacccggcc
cgcgagctggcccgcacggtggcgcaggcggccgggctgtccgtgctcgcggcggcacgg
ctcgacgtcgtctcgcaacccgcccgtttcgtcggggcgctgtcggatctgctcgccctg
ggtccggccgccgccggcggcgggaccaccccgccgacccggcgggtggtgatcgtcgtc
gaccagttcgaggagacgttcaccctgtgcgcggatgaggaggagcgcggcgcgttcatc
cgcgcgctggtcgccgcgtgccgcggggacggggccacccgtccaccggcggtcgtcgtc
atcggcgtccgcgccgacttctatggctggtgcgcggcctatccggagctggtggacgcg
ctccagacggggcaggtcgtggtcgggccgatgaccgcggcggaggtgcgcgacgccatc
gtgaagccggccgaggcggtagggctcacggtggagccgggcctggtcgatctgatgctg
cacgacatcggcgccgacgagcacggcgtcgtcgccgaccccggatcgttgcccctgctc
gcgcacgcgctgcgcgccacctggcgggaacgcgagaacggcactctgacggtggccggt
tacctgcgggccgggggtctacggggggccatcgcccggacggcggaggagaccttcggc
acgctggacgcggccggccaggatgcggcctggcagatcctgctacagatgatccagttc
ggggatgggacggacgacacccgccgccgcgtctcacgcaccgagctgctgtccacgtcg
gcgtcagcccagaactcggcgtcagcccagaactcggcgtcagcccagaactcggcgtca
gcccagaactcggcgtcagcccagaacgtctccgccgtcctcgacgcgctggtcgccgcc
cgactcgtcaccgtggacgccgacaccgtcgagatctcccacgaggcgctgctgcgctcg
tggccgcggctgcgcgagtggatcgaggtcgatcgtgccgcggcggtgacccgacagcgg
ctcaccgacgccgcggccacctgggacgacggcgggcgggacccgtcctacctgttcgcc
ggcagtcggctggcgaccgtccgggagtgggcgcaggccgggcagcggcagacggcactg
agcccggtcgcgcgggactttctggcggcctccctcgcggccgagcaggcggcgcggcgg
gccgaggtccggcggaccaggcggctgcaccagctcgtcgccgctctcacggtgctgacc
ctgatcgccggtggagcgatggcgttcgccttccggcaacgggcccagatcgccggcgag
cgggaccgggcgctgtcggtggcgatcggccggcaggccgaccagctacgcaggtccgac
ccgctggccgccgcccagctcggcgccgtcgcctaccgcctggcgccgacggcggaggcg
cgcagcgccgtgctgtcgacgttcgcgagcgactacggcttcgccacccgtcacctcggc
acgcagacccgtccgatcggcgcggtcgcctacagccgggacggcaggctggtggcgacg
gcgagcgacgactggacggtcgccctgtggtccgcgtcagaccccacccgccgcaccccg
ctcagcacgatcaggggccaccggctggcggtgaaatccgtggcgttcagcccggacggc
cggttcgtcgccaccgggagcgacgaccggacggtccggctgtggaccatcaccgatccc
actcacccggtgctcgcggcgacgttacccggcgcctccgactcgatccacgggctggcc
ttccgctccgacagccgggtccttgccaccggcgggtacggatcacaggtgcggctgtgg
gacgtctccgacgtgagcgcgatccggccggccggcgcgatcaccgcccacaccgcgaac
gtccgtgccgtcgcgttcagtcccgacggcaccgagctgctgaccggtggcgacgacggc
cgggccctgctgtgggacgtgcgggacctcgccgccccggcggagctgagcgagctgaag
ggcgaggcgggcccgaatgtcgtgctcagcgcgaacacggccgtccgtgcggtcgccatc
agcccggacgggaagacggcggtgaccggcagcgacgacaccaccgcgcgggtcttcgat
ctcaccgacccgcgacggccgaccaccctccaggtcatcgacgaggtgcgatcggtcgag
gcggtggcggtcaacgtggacggcctcgtggccgtgggggtgaacagcgcggtcgagatc
tacgatccgtcccgccatttcgacgccatcgcggtcctgccgcacgcgtcgaagccgtgg
gcgttggccttcagcccggacgggcgaaccctcgcctccggtgccgacgaccgcaccctg
cgcctgtgggacgtgccggggccggtgctggtcgggcaccaccgcttcctgtggtcgacg
gcggtccatccgaacgggcgggtcctagccaccggggactacgggcagaccgtccggctg
tgggatgcgcatgaccccgatcggccgctaccggccgccacgttgaccggattcaacgcc
gcggtcggcagcgtccggttcaccccgaacggcagggtcctcatcgccggcagcctcgac
tacgccaccgacttcgacggcatggtcacgctgtgggacgtcgccgacatccaccgtccc
aggctgctgtccaccatccatcccggcatcggcgggatcaaggacctggaggtcagcccg
gacggccggaccctcgcgctggccggcacgagcgcccggctggccctggtggacatctcc
gccccggccacgccccgggggcggtccgtcctcgcagggcaccgctacgacgtcgccacc
gtcagtttcagcccggacgggcgcaccctggcgtccggaagcagcgaccggaccatccgg
ttgtgggacatcacgacaccggaccgaccggcgggcatcagcacgatcacgggcttcacc
agcgccctgatcaccatcgccttcagccgggacggaaggaccctcgccgtcggcagcttc
gacacgaaggtcgccctgtgggacgtcacggaccgccgggccccccgcgcgctgccctcg
atcatcgggttgggggccggcgtcaactccatcgaattcagctccgacggccggctcatg
gcggcgggcgtcggcggcgcgaacggcgtggtgcggctgtgggacatgtccgatccggcc
gacccggtgccgtacgccaccttcagcggccgctacaacggcttcgctgcggtcgccttc
gccccggacaccgccttcatcgtcggagcgccctaccaggtgatcggattcgtctgggac
ctcgacccggcgagcgtcgtcacgcggctgtgcgcgcgggccggcgacccgctcacccgc
gaggaatggaaacagtacctgccgggcctcgactacgatccgccgtgcggctga

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