Frondihabitans sucicola: GCM10025867_29400
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Entry
GCM10025867_29400 CDS
T09158
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
fsb
Frondihabitans sucicola
Pathway
fsb03060
Protein export
fsb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GCM10025867_29400 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GCM10025867_29400 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fsb02044
]
GCM10025867_29400 (secD)
Secretion system [BR:
fsb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GCM10025867_29400 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_1st
SecD_SecF
MMPL
POTRA
Sec_GG
SusD_RagB
Motif
Other DBs
NCBI-ProteinID:
BDZ50699
LinkDB
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Position
complement(2734984..2736774)
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AA seq
596 aa
AA seq
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MRKLSFYVARSTPAKKALRSLTWLLVIIAAITALNGAATILHKTTNSTAGWWSNASFVPE
LALDLQGGTQVTLQAQLQSGKTVSSDQLNQAVSIIRQRINANGVTEAEINTQGKNNIVVS
IPGKPDAATLNRIESAARLTFRPVLYTEQVSSSSVGKSASATPYVPSKTLDAKPTAKPTD
ASDVSWISARLADLYTNYNCAAPDDVSNAPDDKPLVTCSTDDSGSTSKFILGPVEVEGST
ISDATSGLATNSQGNSTGQWAVNINFNGKGTTEFKNVTSRLVSLTAPRNQFAIVLDGLVI
TAPSTNSAITDGSAQITGTFTSDTAKTLADQLKFGALPINFQVQSNEAISATLGKTQLLS
GLIAGLIGLILVIIYSIIQYRALAFVTVLSLAISGVITYLTIDFLSWHDGYRLSLAGVAG
LIVAIGITADSFIVYFERIRDELRDGRVLESAVEAGWKRAIRTILASDTVNFLAAVTLYI
LAVGNVKGFALTLLITTLIDVVVVTLFTHPMLRLIARTRYFGGGHRFSGLDPNALGAVYR
GRASFREPVVAGGRKKAGGKEVEKRQTIAERRAAEAAAAKEAASEKTQGTTSEKDS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagctgagtttctacgtggcacgatcgacgcccgcgaagaaggccctccgttcc
ctgacctggctgctggtgatcatcgccgcgatcaccgcgctcaacggggccgcgacgatc
ctgcacaagacgaccaactcgaccgcgggctggtggagcaacgcgagcttcgtccctgag
ctggcgctcgacctgcagggcggcacgcaggtcacgctgcaggcgcagctccagagcggt
aagacagtgtcgtccgaccagctcaaccaggccgtctcgatcatccgtcagcgcatcaac
gccaacggcgtgaccgaggccgagatcaacacgcagggcaagaacaacatcgtcgtgtcg
atccccggcaagcccgacgccgccacgctgaaccggatcgagtcggccgcccggctgacg
ttccgccccgtcctctacaccgagcaggtctcctccagctcggtcggcaagtcggcttcg
gcgacgccctacgtcccgagcaagactctcgacgccaaacccacggccaagcccaccgac
gcgagcgacgtctcctggatctcggcgcggctcgccgacctctacacgaactacaactgc
gcggctcccgacgacgtctccaacgctcccgacgacaagccgctggtcacctgctccacc
gacgacagcggcagcacgtcgaagttcatcctcggcccggtcgaggtcgagggctcgacg
atcagcgacgcgaccagcggcctggcgaccaactcgcagggcaacagcaccggtcagtgg
gccgtcaacatcaacttcaacggcaagggcacgacggagttcaagaacgtcaccagccgc
ctggtgtcgctcaccgctccgcggaaccagttcgccatcgtcctcgacggcctcgtcatc
accgccccgtcgaccaactcggccatcaccgacggctcggcgcagatcacaggtaccttc
acgtccgacactgccaagacgctcgccgaccagctcaagttcggcgccctgccgatcaac
ttccaggtgcagagcaacgaggccatctcggcgacgctcggcaagacgcagctgctgtcc
ggcctcatcgccggtctcatcgggctgatcctggtgatcatctactcgatcatccagtac
cgcgccctggccttcgtcacggtgctgtcgcttgcgatctcgggggtgatcacctacctc
accatcgacttcctctcctggcacgacgggtaccgcctgtcgttggcgggcgtagcgggt
ctgatcgtggccatcggcatcacggccgactccttcatcgtctacttcgaacgaatacgt
gacgaactgcgcgacggcagggttctcgaatcggccgtcgaggcgggctggaagcgcgcc
atccgcacgatcctcgcctccgacacggtcaacttcctcgccgcggtcacgctctacatc
ctggccgtcggcaacgtgaagggcttcgctctgaccctgctcatcacgacgctgatcgac
gtcgtcgtggtgaccctgttcacgcaccccatgctgcgactcatcgcccgcacccgctac
ttcggcggcgggcaccgcttctccggcctcgacccgaacgcgctcggcgccgtgtaccgc
ggtcgcgcctcgttccgggagccggtggtggcgggaggccgcaagaaggccggtggcaaa
gaggtcgagaagcggcagacgatcgccgagcggcgcgcagccgaagctgcagcggcgaaa
gaggctgcgtcagaaaaaacccaaggcaccacgtccgagaaggattcctga
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