Fibrobacter succinogenes: FSU_1218
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Entry
FSU_1218 CDS
T02105
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
fsc
Fibrobacter succinogenes
Pathway
fsc00521
Streptomycin biosynthesis
fsc00523
Polyketide sugar unit biosynthesis
fsc00541
O-Antigen nucleotide sugar biosynthesis
fsc01100
Metabolic pathways
fsc01110
Biosynthesis of secondary metabolites
fsc01250
Biosynthesis of nucleotide sugars
Module
fsc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FSU_1218 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FSU_1218 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FSU_1218 (rfbC)
Enzymes [BR:
fsc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FSU_1218 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADL25806
UniProt:
C9RNE1
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All DBs
Position
complement(1390798..1391361)
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AA seq
187 aa
AA seq
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MSKFNFINTEIEGVKIIEPTVFGDARGYFMETYSKRDFAEGGIDVDFVQDNESRSRKGVL
RGLHFQKQNPQGKLVRVIEGEVFDVAVDLRKNSKTFGKWVGVTLSAENKKQFYIPEGFAH
GFVVLSETAAFVYKCTRFYAPNDEGGLFWNDPAIGIKWPVGEGFEPLLSEKDTKNPLLKD
LDFAFDL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattcaactttataaatacagaaatcgaaggtgttaagattattgaaccgacg
gtgtttggtgacgctcgcggttactttatggaaacttacagcaagcgcgactttgccgaa
ggcggcattgacgtagactttgttcaagataacgagtcccgttcgcgcaagggcgttctc
cgcggtctccacttccagaagcagaatccgcagggcaagcttgtccgcgtgattgaaggc
gaagtctttgacgtggccgtggacctccgcaagaacagcaagacttttggcaagtgggtg
ggtgttacgctctccgccgaaaacaagaaacagttctacatcccagaaggctttgcacac
ggtttcgtggtactttccgaaacggctgcatttgtctacaaatgcactcgcttctacgct
ccgaatgatgaaggcggccttttctggaacgacccggctatcggcatcaagtggccggtg
ggcgaaggttttgaaccgctcctctctgaaaaggataccaagaatcctcttctcaaggac
cttgatttcgcttttgacctttag
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