KEGG   Flavobacterium sediminis: DI487_00335
Entry
DI487_00335       CDS       T06625                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
fse  Flavobacterium sediminis
Brite
KEGG Orthology (KO) [BR:fse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fse03016]
    DI487_00335
Enzymes [BR:fse01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     DI487_00335
Transfer RNA biogenesis [BR:fse03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DI487_00335
 Prokaryotic type
    DI487_00335
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B_4 Lactamase_B Lactamase_B_6 PDEase_II
Other DBs
NCBI-ProteinID: AWM12476
UniProt: A0A2U8QRK1
LinkDB
Position
complement(75531..76436)
AA seq 301 aa
MKLTVLGCYAATPRTLTNPTSQLFEIKNQMFLIDCGEGTQVQLRKHKIKFSRINHIFISH
LHGDHLYGLIGLISTFTLLNRVNDLHVYGPKGIKEIILLQLKASASYTSYNLYFHELESK
ESELIYEDDHVTVRTIPLAHRIYTNGYLFREKNSQRKINIDEVKKYDIDVCYYQKIKNGG
DVVLEDGTVVDNKLLTFNPEPEKSYAFCSDTVFNPGMVPLIKNVDVLYHESTFLESEAHL
AERTMHSTAIQAATIAKEAEVKHLVLGHYSTRYASIDAFKEEAEAIFPNVLLADDGISFD
F
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaattaaccgttttaggctgttatgcagcaactccgagaactttaacgaatcctact
tcccaactttttgaaatcaaaaaccagatgtttttgattgattgcggagagggaactcag
gtgcaacttcgtaaacataagatcaagttttcccggattaaccatatttttatttcgcat
ttacatggtgaccacctttatggactgatcggattgatctctacttttacactacttaac
agagttaacgatctgcacgtttacggtccaaaagggattaaggaaattatacttttacaa
ctgaaagcttcagcttcctatacaagttataatctttattttcatgaattagaatctaaa
gaaagtgagttgatctatgaagacgatcatgtaacggtgagaacgattcctctggcacat
cgtatatatacaaatggttatcttttccgggaaaagaatagccagcgaaagatcaatata
gatgaggttaaaaaatacgatattgatgtatgttattatcaaaagatcaagaacggagga
gatgtagttttagaggatggaactgttgtagataataagttgttgacttttaacccagaa
ccggagaaaagttacgctttttgtagtgatacggtttttaatcccggaatggttccttta
atcaaaaatgtagatgtattgtatcatgaatctacttttttagaatcagaagctcattta
gcggaaagaactatgcattctacggctatacaagcggcaacaatagcaaaagaagctgag
gttaaacatttggttttggggcattattctacacgttatgcttctattgatgcctttaag
gaagaggctgaggctatttttccgaatgtgttattagcggatgacggtatttcgtttgat
ttctaa

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