Candidatus Fervidibacter sacchari: Q2T83_11670
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Entry
Q2T83_11670 CDS
T09227
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh02024
Quorum sensing
fsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q2T83_11670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q2T83_11670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsh03019
]
Q2T83_11670
03036 Chromosome and associated proteins [BR:
fsh03036
]
Q2T83_11670
Messenger RNA biogenesis [BR:
fsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Q2T83_11670
Chromosome and associated proteins [BR:
fsh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Q2T83_11670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
DUF4834
Phage_sheath_1C
DUF5892
GTA_holin_3TM
TERB2
Presenilin
Motif
Other DBs
NCBI-ProteinID:
WKU14993
LinkDB
All DBs
Position
2529985..2530347
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AA seq
120 aa
AA seq
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MSNEKQMKIQDGYLNFLRRERIPVAVHFFTGMQLRGIVRGFDTYTFVLELEGTNKQVLIF
KHGVLYVDPMRPVGDIVGRLIAEAQQAEQARQAQQQSKQQQQNQQQQQQKRPRQQAPAES
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatgagaagcagatgaagattcaggacggctacctaaacttcctgagaagggaa
cgcatccctgtggcagtgcatttcttcacgggaatgcaactgagaggtatcgtgcggggg
tttgacacttacactttcgtgctggaacttgaagggacaaacaagcaagtcctcatcttc
aaacatggcgtgctgtatgttgacccgatgagacccgttggagatattgtcggtcggcta
attgctgaggctcaacaagcagaacaagcacgccaagcccaacaacaaagcaagcagcaa
cagcagaatcaacagcagcaacaacaaaagcgtccccgccagcaagcacccgccgaatct
tag
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