Candidatus Fokinia solitaria: Fsol_00568
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Entry
Fsol_00568 CDS
T05415
Name
(GenBank) putative DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
fso
Candidatus Fokinia solitaria
Pathway
fso03030
DNA replication
fso03430
Mismatch repair
fso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Fsol_00568
03430 Mismatch repair
Fsol_00568
03440 Homologous recombination
Fsol_00568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fso03032
]
Fsol_00568
03400 DNA repair and recombination proteins [BR:
fso03400
]
Fsol_00568
Enzymes [BR:
fso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Fsol_00568
DNA replication proteins [BR:
fso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Fsol_00568
DNA repair and recombination proteins [BR:
fso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Fsol_00568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AWD33355
UniProt:
A0A2U8BSR8
LinkDB
All DBs
Position
618495..619616
Genome browser
AA seq
373 aa
AA seq
DB search
MLNFINYSTNISKSALSHLFKALMIDRVPGTILIEVEHLYSLSIGLKLSILILSEILKGK
EKHTLELMISHFLNNFGFFFDENELNNLLNHPDLMVISSTYSNKQCTPKAIESISMEDVK
QAEHFMSLTQYGKKKVLLLHDISTMSISAANALLKTLEDVPRDAIILMTVSKRTMVQETI
LSRCIIFKLATAPLKEVKNSVDASTFEKIEVIFKLCEKDLNSVNDVMSLLRKEHSIGYAG
TMAKNIIFAMDTYSENDSATLLQKTKTLLHLLQQFTRSTKVEKSVEEEKILQKSILFFTH
EILIQFSCKLFHNTKTEVDYIQQMQNFKISKLLSSYTSILNLNYKHLDRHTLLHVIANKC
VQILNELLQIVKA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaattttataaattatagtacaaatatatcaaagagtgcactgtcacatctcttc
aaagcactcatgatagatcgggtgcctggtacaatattaatagaagttgagcatctttac
agtcttagcattggacttaagctatctattctcatcttatctgaaattctcaaaggaaag
gagaagcatacgctagagcttatgatatctcactttctgaataatttcggattcttcttt
gacgagaatgaattaaacaatcttttaaatcatcctgatttaatggtcattagtagtacg
tactccaataaacagtgcactcctaaagcgatcgaaagtatatcaatggaagatgtcaag
caagcagaacactttatgtctcttacacagtatggcaagaaaaaggtactgcttcttcac
gatatttcaacgatgagcattagcgccgcaaatgcgcttttaaaaactctggaagatgtg
ccacgcgatgccataatattgatgactgtatctaaacgtacaatggtacaagaaacgata
ctgtctcgatgcatcattttcaaactcgctactgcaccactaaaggaggtaaaaaactcc
gtagatgctagtacatttgagaaaatcgaagtgatattcaagctgtgcgaaaaagatcta
aattctgtgaatgatgttatgtctcttttacgcaaagaacatagtataggatatgcaggc
actatggctaagaatatcatattcgctatggatacatactctgaaaatgatagtgctact
cttttacaaaaaacaaagacactactacatttactacaacaatttactagatctacaaaa
gttgaaaagagcgttgaggaagagaagatattgcagaaatcaatattatttttcactcat
gaaatattgatacagttctcatgcaagctatttcacaatacaaaaacagaagtggattac
atacagcaaatgcagaacttcaaaatctccaaactactgagtagctacacttctattttg
aatttgaactataagcacttagatagacatacgctactacacgttatagcaaataagtgc
gtgcaaatactgaatgaattgctgcaaattgtaaaagcgtga
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