Fusobacterium ulcerans: C4N20_10885
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Entry
C4N20_10885 CDS
T05433
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ful
Fusobacterium ulcerans
Pathway
ful03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4N20_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ful03400
]
C4N20_10885
DNA repair and recombination proteins [BR:
ful03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4N20_10885
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4N20_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
nSTAND3
AAA_16
RsgA_GTPase
AAA_21
Viral_helicase1
ATPase_2
AAA_24
FtsK_SpoIIIE
DnaJ_CXXCXGXG
DUF4350
cobW
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AVQ28568
UniProt:
A0A2P1S560
LinkDB
All DBs
Position
2350812..2353880
Genome browser
AA seq
1022 aa
AA seq
DB search
MLDKIVIRGAREHNLKNIDIEIPKNKFVVITGVSGSGKSSLAFDTIYSEGQRRYVESLSA
YARQFIGQMNKPEVDSIEGLAPAISIEQKTTNRNPRSTVGTITEVYDYMRLLFAHIGTAH
CPICGRKVEKQSTEEITEGAIERFQEGDKIIVLAPVVKDKKGTHKNLFLNLLKKGYVRAR
VNGTILYLEDEINLDKNLKHNIEVVVDRLVLKKNDKEFQSRLTQSIETTTELSNGKVILN
VNNQDYAYSENFACPEHDEVSIPDLNPRLFSFNAPFGACPECKGIGKNLEVDENKLIDND
ELSIVEGGMYIPGAMARKGYSWEIFKAMAKHLKIDINKPIKDLSKRDMEIIFHGSDVKFK
FDYEGDDFQFHGYKQYEGAVKNLERRYHETFSDAMKEEIENKYMVERVCKVCNGKRLKPE
VLSVTVGDKNIMEICELSIKDSLKFFLDLKLTNKQELIAKEILKEIRERLSFMINVGLDY
LNLARETKTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLGRLKDL
GNTLIVVEHDEDTMLQADEILDLGPGAGDFGGEIVAYGTPKEIMENKESITGKYLKGDLK
IEIPEKRRKWKKSIKVIGAKGNNLKNIDVEIPLGVMTVVTGVSGSGKSTLINHTLFPALF
NKLNKGKLYPLEYKEIKGIEELEKVINIDQSPIGRTPRSNPATYTKLFDDIRTIFAETKD
AKLHGFTKGRFSFNVKGGRCEACQGAGIIKIEMNFLPDVYVECEVCKGKRYNKETLDVYY
KGKNISDVLNMSVREAYEFFKAVPSLERKLKVLMDVGLDYIKLGQPATTLSGGEAQRIKL
ATELSKMTKGKTIYILDEPTTGLHFEDIRKLLEVLDRLVEKGNTVVIIEHNLDVIKTADH
IIDIGPDGGDRGGTVVASGTPEEISDAEKSYTAVYIDRMLKGAGRKENKKTQKKAAEVIT
VSDETMLKGTGKKENKKTQKKTAKVVPVFDETMLEAAEEVPVIDYEEKPKKRGRKKKEEL
GK
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgttagataaaatagtaataagaggtgccagagaacataatctaaaaaatatagatatt
gaaattccaaagaataaatttgtggttatcactggggtgagcggaagtggaaaatcttct
cttgcttttgatactatttattctgaaggtcaaagaagatatgtagaaagtctttctgct
tatgccagacaatttattggtcagatgaataagccggaagtagatagtatagagggattg
gctcctgctatatctattgaacagaaaactactaacagaaaccctcgttctacagtagga
actattacagaagtttatgactatatgagacttctttttgcacatataggaacagctcac
tgccctatctgtggaagaaaagttgagaagcagagtacagaagagataactgagggagca
atagagagatttcaggagggagataaaataatagttttagctcctgtggtgaaggataaa
aaaggtacacataaaaatcttttccttaatcttttgaaaaaagggtatgtaagagcgaga
gtaaatggaacaatcctttatttagaagatgagattaatcttgataaaaaccttaaacac
aatatagaagtagttgttgacagacttgttttaaagaaaaatgacaaagagtttcaaagt
agattgacacaatcaattgaaactactacagaactttcaaatggtaaagttattttaaat
gtaaataatcaagactacgcatatagtgaaaactttgcctgtcctgagcatgatgaggta
agcatacctgatttgaatccaagacttttttcattcaatgcaccatttggagcttgtcct
gaatgcaaagggataggaaaaaatctggaagtagatgaaaataagcttatagataatgat
gagctctctattgtagagggaggaatgtacatcccaggagccatggctagaaaagggtat
agctgggaaatatttaaagcaatggcaaaacatctgaaaatagatattaataagcctata
aaagatctctcaaaaagagatatggaaataatatttcatggaagtgatgtaaaatttaaa
ttcgattatgaaggggacgacttccagtttcatgggtataagcagtatgaaggagcagta
aaaaatcttgaaagaagatatcatgagactttttcagatgccatgaaagaagagattgaa
aataaatatatggttgaaagagtatgtaaagtctgcaatggaaagagattgaagccagaa
gttttatctgtaactgttggagataaaaatattatggagatatgtgagttaagtataaag
gattcacttaaatttttccttgatctgaaactgacaaacaaacaggagcttatagctaaa
gagatactgaaagagataagagaaagactttcatttatgataaatgttgggcttgattat
ctaaatttagctcgtgagacaaagactctttcaggaggagaagctcaaagaataagactt
gcaactcagatagggtcaggtcttacaggggtgctttatgtgctggatgaaccaagtatt
ggtcttcaccaaaaggataatgacaagcttcttgcaactttaggaagacttaaagatttg
ggaaatactctaatagtagtggaacatgatgaagatactatgctgcaagctgacgagata
ttggacttgggaccaggagcaggggattttggtggagaaatagttgcctatggaactcct
aaggaaataatggaaaataaagaatctatcactggaaaatatttaaaaggtgatttgaaa
atagagattcctgaaaaaagaagaaaatggaaaaaatctataaaagtaataggagcaaag
ggaaataatctgaaaaatatagatgttgaaattcctttaggagtaatgacagtagttaca
ggggtaagtggaagtggaaaatctacacttatcaatcatactctgtttcccgcacttttt
aacaagctgaataaaggaaagctgtatcctttggagtataaagagataaaaggaatagag
gaacttgaaaaagtcataaatattgaccagagcccaatagggagaactccaagatctaac
ccagctacttatactaaactttttgatgatataaggactatctttgctgaaacaaaagat
gctaaattacatggatttacaaagggaagattttcttttaatgtaaaaggtggaagatgt
gaagcatgtcagggagcaggaataatcaaaatagaaatgaacttccttccagatgtatat
gtagagtgtgaagtatgtaaaggtaaaagatacaataaggaaacactagatgtatactac
aaagggaaaaatatttctgatgtactgaacatgagtgtaagagaagcttatgagtttttt
aaagctgttccatctcttgagagaaaattaaaagtacttatggatgtaggacttgactat
ataaaacttggacagcctgcaactactctttcaggaggagaggcacaaaggataaaactt
gcaactgaactttctaaaatgacaaaaggtaagactatatatattttagacgaacctaca
acaggactgcattttgaagatataagaaaacttctggaagtattagacagactggtagaa
aaaggaaatacagtggttatcatagagcacaatctagatgttatcaaaacagctgaccat
ataatagatataggtcctgatggaggggacagaggtggaacagtagtagcatctggaact
ccagaggaaatatctgatgcagaaaaaagctatactgctgtatatatagacagaatgctg
aaaggtgcaggaagaaaagaaaataagaaaactcaaaagaaagcagctgaagtaattaca
gtatctgatgaaactatgctgaaaggtacaggaaaaaaagaaaataaaaaaactcaaaag
aaaacagctaaagtagttccagtatttgatgaaactatgttggaagctgctgaagaagtg
cctgtaatagattatgaagagaagcctaaaaaaagaggaagaaaaaagaaagaggagctg
gggaaatag
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