Fusobacterium varium: FV113G1_07480
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Entry
FV113G1_07480 CDS
T05280
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
fva
Fusobacterium varium
Pathway
fva00521
Streptomycin biosynthesis
fva00523
Polyketide sugar unit biosynthesis
fva00541
O-Antigen nucleotide sugar biosynthesis
fva01100
Metabolic pathways
fva01110
Biosynthesis of secondary metabolites
fva01250
Biosynthesis of nucleotide sugars
Module
fva_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FV113G1_07480 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FV113G1_07480 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FV113G1_07480 (rfbC)
Enzymes [BR:
fva01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
FV113G1_07480 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FV113G1_07480 (rfbC)
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GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BBA50401
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All DBs
Position
841255..842682
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AA seq
475 aa
AA seq
DB search
MNKLKKIETNLQGIYIVEPLVFRDDRGFFLESYNKTEFEKIGIFEEFVQDNHSKSKKGVL
RGLHFQTKHSQAKLVRVIKGRILDIVVDIRKNSGTYGKWHGIELSAENKKMLYVSKGFAH
GFLTLEDDTEIEYKCDEFYVPQYDSGIMWNDKDININWNFEKYGLKEEDIILSEKDTKHQ
SFKEYTEKYIGENVLLTGADGQLGQDFQKLFDKLKIKYTATDYKELDVTNKEKVKEFVDK
NNFTIIINCAAYNNVDKAEEEQEKCFVLNSHVPKYLSKICKERNIVFVTYSTDFVFDGEK
EVPYTEKDIPNPLSIYSKAKLEGEKYSLEYEKSFVIRTSWVFGMGNNNFCKQVINWSKGK
DRLRIVDDQISSPTYSKDLAEYSWKLVQTDKYGLYHLSNDGEASKFEQAQYTLKKIGWNG
ILERAKTKDFPLPAKRAEYSKLDSSKIEKIINKKIPHWKSGIDRFLEEMKEKGEI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattaaaaaaaatagaaacaaacttacaaggaatatatatagtagagccttta
gtatttagagatgatagaggtttttttcttgagtcatataataaaactgaatttgaaaaa
atagggatatttgaagaatttgtgcaagataaccattctaaatctaaaaaaggtgtactt
agaggacttcattttcaaactaagcattcccaagcaaagcttgtgagagtaataaaaggg
agaatacttgatattgtagttgatattagaaaaaatagcggcacatatggaaaatggcat
ggaatagaattaagtgcagaaaataaaaaaatgctatatgtatcaaaaggttttgctcat
ggatttcttactttagaagatgatacagaaatagaatataaatgtgatgaattttatgta
cctcagtatgattcaggaataatgtggaatgataaagatataaatatcaattggaatttt
gaaaagtatggactaaaagaagaggatataattttatctgagaaagatacaaaacatcaa
tcttttaaggaatacacagaaaaatatataggagaaaatgtattgcttacaggagcagat
ggacagctaggtcaggatttccaaaaactttttgataagttgaaaataaaatatacagct
actgactataaagaattagatgtaactaacaaagagaaagtaaaagaatttgtagataag
aataattttactataataataaattgcgcagcatataataatgtggataaggcagaagaa
gaacaggagaaatgctttgttttaaattcacatgtacccaaatacttatcaaagatatgt
aaagaaagaaatatagtatttgtaacatattcaacagattttgtatttgatggagaaaag
gaagtaccatatacagaaaaagatattcctaatcctttatcaatatattcaaaagcaaag
ctagaaggtgaaaaatattctctggaatatgaaaaaagttttgtaataaggacatcatgg
gtatttggaatgggaaataataatttctgcaaacaagtaattaactggtcaaaaggaaaa
gatagattgagaatagtagatgatcaaatatcttctccaacatattcaaaggatttggca
gaatattcatggaaacttgttcaaacagacaaatatggattgtaccatctatcaaatgat
ggggaagcatcgaaatttgaacaggcgcaatatacattaaaaaaaataggatggaatgga
atattggaaagagcaaaaacaaaagactttcctttaccagcaaaaagggcagaatactca
aagttagatagtagtaagatagaaaaaataattaataaaaagataccacattggaaaagt
ggaatagatagatttttagaagaaatgaaagaaaagggagagatatag
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