Fusobacterium varium: FV113G1_25560
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Entry
FV113G1_25560 CDS
T05280
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fva
Fusobacterium varium
Pathway
fva03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FV113G1_25560 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_25560 (uvrA)
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FV113G1_25560 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FV113G1_25560 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
nSTAND3
AAA_16
RsgA_GTPase
Viral_helicase1
AAA_21
ATPase_2
FtsK_SpoIIIE
AAA_24
DnaJ_CXXCXGXG
cobW
DUF4350
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BBA52206
LinkDB
All DBs
Position
complement(2837161..2840148)
Genome browser
AA seq
995 aa
AA seq
DB search
MLDKIIIKGAREHNLKNIDIEIPKNKFVVITGVSGSGKSSLAFDTIYSEGQRRYVESLSA
YARQFIGQMNKPEVDSIEGLAPAISIEQKTTNRNPRSTVGTITEVYDYMRLLFAHIGTAH
CPICGRKVEKQSTEEITEGAIERFQEGDKIIVLAPVVKDKKGTHKNLFLNLLKKGYVRAR
VNGTILYLEDDIVLDKNLKHNIEVVIDRLVLKKNDKEFQSRLTQSVEAATELSNGKVILN
VNNQDFAYSENFACPEHDEVSIPDLNPRLFSFNAPFGACPECKGIGKNLEVDENKLIDND
ELSIVEGGMYIPGAMARKGYSWEIFKAMAKHLKIDINKPIKDLSERDMNIIFHGSDVKFK
FDYEGDDFQFHGYKQYEGAVKNLERRYHETFSDAMKEEIENKYMVERICKVCNGKRLKPE
VLSVTVGEKNIMEICELSIKDSLKFFLDLRLTNKQELIAKEILKEIRERLSFMINVGLDY
LNLARETKTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQKDNDKLLATLGRLKDL
GNTLIVVEHDEDTMLQADEILDLGPGAGDFGGEIVAYGSPKEVMENKESITGKYLKGELK
IEIPEKRRKWKKTIKVIGAKGNNLKNIDVEIPLGVMTVVTGVSGSGKSTLINHTLFPALF
NKLNKGKLYPLEYKEIRGIEELEKVINIDQSPIGRTPRSNPATYTKLFDDIRTIFAETKD
AKLHGFTKGRFSFNVKGGRCEACQGAGIIKIEMNFLPDVYVECEVCKGKRYNKETLDVYY
KGKNISDVLNMSVREAYEFFKAVPSLERKLKVLMDVGLDYIKLGQPATTLSGGEAQRIKL
ATELSKMTKGKTIYILDEPTTGLHFEDIRKLLEVLDRLVEKGNTVVIIEHNLDVIKTADH
IIDIGPDGGDRGGTVVACGTPEEISDVEESYTAVYIDRMLKGAGRKENKKVQKKKAKITP
VFNESVLEAAEEVSEIDYKEKPKKRGRKKKEELGK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaagataataataaaaggtgcaagagaacataatttaaagaatatagatatt
gaaattccaaagaataaatttgtagttataactggtgtaagtggaagtggaaagtcgtca
cttgcctttgatactatttattctgaagggcagagaagatacgtagaaagtctttccgct
tatgcaagacaatttattggacagatgaataaaccagaagtagacagtatagaaggatta
gctcctgctatatctattgaacagaaaacaactaacagaaaccctcgttctactgtagga
actattacagaagtatatgactatatgaggcttctttttgcacatataggaacagctcat
tgccctatttgtggaaggaaagttgaaaaacaaagtacagaagagataacagagggagct
attgaaagatttcaagaaggggataaaataatagttttagctccagttgtaaaagataaa
aaaggaacacataaaaacctttttcttaatcttttgaaaaaaggatatgtaagagcaaga
gtcaatggaactattctttatcttgaggacgatatagtccttgataaaaaccttaaacat
aatattgaagtagtaatagacagacttgtattgaaaaaaaatgataaagaatttcaaagc
agactgacacaatctgttgaagcagctacagaactttcaaatggaaaagttattttgaat
gtaaataatcaggattttgcatatagtgaaaattttgcctgcccagaacatgatgaagta
agtatacctgatcttaatccaagattattttctttcaatgctccatttggagcttgtcct
gaatgtaagggaattggaaaaaatcttgaagttgatgaaaataaattaatagataatgat
gaattatctattgtcgagggaggtatgtatataccaggtgccatggctagaaaaggatat
agctgggagatattcaaagcaatggcaaaacatttgaaaatagatattaataagcctata
aaagatctttctgaaagagatatgaatataatatttcatggaagtgatgttaaatttaaa
tttgattatgaaggtgatgattttcaatttcatggatataaacaatatgaaggagcggta
aaaaatcttgaaagaagataccatgaaacgttttctgatgcaatgaaggaagaaatagaa
aataaatatatggttgaaagaatatgtaaagtctgcaatggaaaaagattgaagccagaa
gttctttctgtaactgttggagaaaaaaatatcatggagatatgtgaattgagtataaaa
gattcacttaaattttttcttgatttaagacttactaataaacaggagcttatagctaaa
gagatactaaaagagataagagaaagactttcattcatgataaatgtgggacttgactat
ttaaatctagctcgtgaaacaaaaactctttcaggaggagaagctcaaagaataagactt
gcaactcagataggatcaggacttacaggggtactttatgtgttggatgaaccaagtatt
ggtcttcatcaaaaggacaatgataaacttcttgctactttaggaagacttaaagattta
ggaaatactttaatagttgtagaacatgatgaagatactatgcttcaagctgatgagata
ctggacttaggaccaggagcaggagattttggtggagaaatagttgcttatggtagtcct
aaggaagtgatggaaaataaagaatctattacaggaaagtatttaaaaggagagttgaag
atagagatacctgaaaaaagaagaaaatggaaaaaaactataaaagtaataggagcaaag
ggaaataatctaaaaaatatagatgttgaaattcctttaggagttatgacagtagttact
ggagtaagtggaagtggaaaatctacacttattaatcataccctgtttccagcacttttt
aataaactgaataaaggaaagctctatcctttggagtataaagaaataagaggaatagag
gagcttgaaaaggttataaatattgaccagagtccaataggaagaactccaagatctaac
ccagctacttatactaagctttttgatgatataagaactatttttgctgaaacaaaagat
gctaaattgcatggatttacaaagggaagattctcttttaatgtaaaaggtggtagatgt
gaagcatgtcagggagcaggaataattaaaatagaaatgaattttcttccagatgtatat
gtagaatgtgaagtatgtaaaggtaaaagatataataaagaaacattggatgtatactat
aaaggaaaaaatatttctgatgtactaaatatgagtgtaagagaagcttatgaattcttt
aaagctgtaccatctcttgagagaaaattaaaagtacttatggatgtaggacttgactat
ataaaacttggacagcctgcaactactctttctggaggagaagctcagaggataaaactt
gcaactgaactttctaaaatgacaaagggtaaaactatctatattttagatgagcctact
actggactgcactttgaagatataagaaaacttttggaagtactggataggctggtagag
aaagggaatacagtagttattatagaacataacctagatgttatcaaaacagctgatcat
ataatagacataggtccagatggaggagacagaggtggaactgtagtagcttgtggaact
ccagaagaaatatctgatgtagaagaaagttatactgctgtgtatatagacagaatgtta
aaaggagcaggaagaaaagagaataaaaaagttcagaagaaaaaagctaaaataacacca
gtattcaatgaaagtgtactagaagctgcagaagaagtatctgagatagattataaggag
aagcctaaaaaaagaggaagaaaaaagaaagaggagctggggaaatag
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