KEGG   Fragaria vesca (woodland strawberry): 101292037
Entry
101292037         CDS       T02666                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    101292037
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fve03400]
    101292037
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     101292037
SSDB
Motif
Pfam: HD HD_assoc_2 LMSTEN DUF1059
Other DBs
NCBI-GeneID: 101292037
NCBI-ProteinID: XP_004304610
LinkDB
Position
LG6:complement(36976452..36980699)
AA seq 470 aa
MGAYNNDGVLLSPIYCSGQDLRFSKHVHDNVHGNIYLDPLSLKFIDTEEFQRLRDLKQLG
VTNSVFPGAVHSRFEHSLGVYWLAGEAVQGLKNYQGLELDIDRFDLQTVKIAGLLHDVGH
GPFSHLFEREFLPRVQSGCHWSHEDMSVKMIDHIVNQHHIDIDPEMIKRVKEMILASGTA
MPITSREKPFLYEIVANGRNGIDVDKFDYIVRDSRACGLGCNFEFKRLMETMRVLDGEIC
YRAKEYLTVHKLFVTRADLYRTVYTHPKVKAIELMVVDALVKANDYLQISSHIEDPAEYW
KLDDSIIKTIETAPNEELKEARDLILRIRRRNLYQFCNEYAVPKEQMEHFKKVTAQDIVC
SQKNGGVILKEEDVAVTNIKIDLTRGSQNPLQSISFFQDYESKEKFPIRDDRISHLLPTS
YQDLIVRVYSKKPELVGPISEAFENFQLKTYGIKAQVCPTPEKKKRPRCF
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggggcttacaacaacgacggcgttttgttgtctccgatatactgttccggccaagac
ctccggttctccaagcacgtccacgacaatgtccacggcaacatttatctcgatccgctt
tctttgaaatttattgatactgaggagtttcagaggcttagagacctgaaacaactcgga
gtgacgaactcagtttttcctggtgctgtgcattcccggtttgagcattcgctcggtgtc
tattggcttgctggtgaagctgttcaggggctcaaaaattatcagggtcttgaactggat
atcgaccgctttgatctccagacggtaaaaattgcaggtctattgcatgatgttggtcat
ggacctttcagtcacttgtttgaacgcgagtttcttccacgggttcagagtggctgccat
tggtctcatgaggatatgtcagttaagatgattgaccacattgttaatcagcatcatatt
gatattgaccctgagatgattaaaagagttaaggagatgatacttgcttctggaactgct
atgccaataacatccagggagaagccttttctgtatgaaattgtggcaaatggccgtaat
ggtattgatgtggacaagtttgattatattgtccgtgacagcagagcttgtgggcttgga
tgcaactttgagtttaaaagattaatggaaacaatgcgtgttttggatggtgagatctgc
taccgtgctaaggagtatctcactgtccacaaattatttgtcactcgagcggatttgtat
cgaacagtttatacacatccaaaagtaaaggccatagagcttatggtggtggatgccctg
gtgaaagcaaatgattatctacagatatcatctcacattgaggatccagctgaatattgg
aagttagatgactcaataatcaaaactattgagacagctccaaatgaagagctgaaggaa
gctagggacttaatcctgcgcattaggaggagaaatctctatcagttctgcaatgagtat
gccgtacccaaggagcaaatggaacatttcaaaaaagtcactgctcaagatattgtttgt
tctcagaaaaatggaggtgttatattgaaagaggaggatgttgctgttaccaacatcaag
attgatttgactcgtggaagtcaaaatccccttcaaagtatcagctttttccaggactat
gaaagtaaggagaaattcccaatacgtgatgatcgcattagtcacttgcttcctacatcg
tatcaagatttgatagtgagggtctattcgaaaaagcctgagctggttgggccaatctct
gaggcttttgaaaacttccagctgaaaacatatgggatcaaggcacaagtatgtcccact
ccagagaaaaagaaacgccctcgttgtttctaa

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