Fragaria vesca (woodland strawberry): 101295542
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Entry
101295542 CDS
T02666
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101295542
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fve01002
]
101295542
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101295542
Enzymes [BR:
fve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101295542
Peptidases and inhibitors [BR:
fve01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101295542
Ubiquitin system [BR:
fve04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101295542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101295542
NCBI-ProteinID:
XP_004303374
LinkDB
All DBs
Position
LG6:19491436..19503024
Genome browser
AA seq
1114 aa
AA seq
DB search
MTMMTPPPVDQEDEEMLVPSTDVVVEGPQPMEVAQVEPASTVDNQPVEEPPTMKFTWTIE
NFSRLNTKKHYSDMFIVGGYKWRILIFPKGNNVDYLSMYLDVADSQALPYGWSRYAQFSL
AIVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPGRGYLVNDTVVVEAEVVVR
KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSI
PLALQSLFYKLQYNESSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLSPESDKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLTDQWYKFDDERVTKEDVK
RALEEQYGGEEEMPQTNPGFNNTPFKFTKYSNAYMLVYIRDSDKDKIICDVDEKDIAEHL
RVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRIQK
QTPFNLFKEEVAKELGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEELQTVGQLREASNKT
HNAELKLFLEVELGPEQVPIPPPDKTKDDILLFFKLYEPEKRELRFVGRLFVKSSTKPIE
IIAKINQMAGFAPDEEIELYEEIKFEPCIMCEHLDKRTSFRLSQIEDGDIICFQKPTPLE
SEECKYPDVPSFLEYVHNRQIVHFRSLEKPKEDDFSLELSKLHTYDDVVEKVASQIGLDD
PTKIRLTAHNCYSQQPKPQPIKYRGVEHLTDMLVHYNQSSDILYYEVLDIPLPELQGLKN
LKVAFHHATKDEVVIHNIRLPKQSTVGDVINVLKTKVELSQPNAELRLLEVFYHKIYKIF
PHSEKIENINDQYWTLRAEEIPEEEKNLGANDRLIHVYHFTKETAQNQMVQNFGEPFFLV
IHEGETLAEVKARIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDVVSSRFQRRDVYGAW
EQYLGLEHADTAPKRSYAVNQNRHTYEKPVKIYN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactcctccacctgtagatcaagaggacgaagagatgctggtgccgtct
acggatgtggtcgtcgaaggtcctcagcccatggaagtagctcaagtggagccggctagt
acagttgataatcagcctgtggaggagcctccaaccatgaaattcacttggacaattgag
aacttttctagattgaacaccaaaaagcactactctgacatgttcatcgtcggtggttat
aaatggcggatactgattttccctaaaggaaacaatgtggactacttgtcaatgtatttg
gatgtggcggattcgcaggcgctgccttatggttggagtagatatgcgcagttcagcttg
gcgatagtgaatcagattcacaacaagtactcaattagaaaggatacacagcaccaattc
aatgcacgagaaagtgattggggattcacatcattcatgcctctcggtgatctttatgac
cccggtaggggttacctggtgaatgatacagtcgttgttgaagccgaggttgttgtccgt
aaagtccttgattactggtcgtatgactcgaaaaaggaaaccggttatgttgggctcaag
aatcagggagcaacttgttatatgaattcacttctccagactttataccatataccttac
ttcagaaaggctgtgtatcatatgccaacaactgagaatgacatgccttcaggaagcatt
cctttggctcttcaaagtttattctataagcttcaatacaacgaaagcagtgttgcaact
aaagaactaaccaagtcttttggatgggatacatatgattcgtttatgcaacatgatgtg
caggaactcaatagagttctatgtgaaaagcttgaggacaaaatgaagggaactgtggtg
gagggtacaatacagcagttatttgaaggacatcacatgaattacattgaatgcatcaat
gtggactacaaatctacaagaaaggagtcattttatgatctccagcttgatgtaaaagga
tgtcgtgatgtttacgcttcttttgataagtatgtggaagttgaacgtcttgagggtgac
aataagtaccatgctgaagaacatggtttgcaggatgctaagaagggtgtcctgtttatt
gacttccctccagttcttcagcttcagctaaagcgatttgagtatgattttatgagggac
actatggtaaagataaatgatcgttatgaatttcctcttcaacttgaccttgatagggag
aatggcaaatatttgtcaccggaatcagataagagtgtgcggaacctctacactcttcat
agtgtcctggttcatagtggtggcgtgcatggaggacattactatgctttcatcaggcca
acccttactgatcagtggtataagtttgatgatgaacgtgtgacaaaagaggatgtgaag
agggcattagaagaacagtatggtggcgaggaagagatgccgcagactaatcctggtttt
aataatactcctttcaagtttacaaagtactcgaatgcgtacatgcttgtgtatattcgg
gatagtgacaaggacaaaataatatgtgatgtggatgagaaggacatagctgaacatcta
agggtaaggttgaagaaagaacaagaggagaaggaggacaagaggagatataaagcacag
gcccatctttatactattatcaaggttgctcgagacgaggacctggcagaacaaatcgga
agggacatatattttgaccttgtggaccatgacaaagttcgtagttttcgaatccagaaa
cagacaccctttaaccttttcaaggaggaagttgcgaaagagttgggaataccagtacaa
tttcagcgattctggatttgggcaaagcggcaaaaccacacatatcggcccaaccgacca
ttgacaccccaggaagaattacaaacagttggacaattgagggaggcatcaaataaaaca
cacaatgcagagctaaagttgtttctggaagtagagcttgggccggagcaagttcctatc
cctccaccggacaaaaccaaggatgatattctacttttctttaagctctatgaacctgag
aaacgagaattacggtttgttggtcggctttttgtgaagagttctaccaagccaatagaa
ataatagcaaaaattaatcaaatggctggttttgctcctgatgaagaaatagaactctat
gaggaaataaagtttgagccttgtatcatgtgtgaacatcttgacaagaggacctcattt
cgattaagtcagattgaagatggtgacattatatgctttcaaaaacctactccactagaa
agtgaagaatgtaaatatcctgatgtaccttcatttttggaatatgtacacaaccgtcag
attgttcattttcgctctttggagaaaccaaaagaagatgatttttctttagaattgtct
aagctacacacttatgatgatgtggtggagaaggtggcttcccaaattggtttggacgat
cctacgaaaatcagactcactgcgcataactgctattctcagcaacctaaaccccaaccc
atcaaatatcgaggagtagagcatttaacagatatgctagtccactataatcaaagttct
gatattttgtattatgaagtcttggacatccccctgccagaattacaaggccttaaaaat
ctgaaagttgcatttcatcatgctacaaaagatgaggtggtgattcacaatataagattg
cccaagcaaagcaccgttggggatgtgattaatgtactaaaaacgaaggtagagctatct
caaccaaatgcagaacttcggcttcttgaggtgttctatcacaagatctacaagatcttc
ccacacagtgaaaaaattgagaatataaatgaccagtactggacattgcgtgcagaggag
attccagaagaagagaaaaacttgggtgctaatgatcgcttgattcatgtttaccacttc
acgaaagagaccgcacagaaccagatggtacagaatttcggggaacctttcttcttggtt
attcatgaaggtgaaactttagctgaagtgaaagcgcgcatacaaaagaaattgcaggtc
cctgatgaggagtttgcaaagtggaagtttgcattcttgtcattgggtcgtcccgagtac
ctacaggacactgatgtagtttctagtcgttttcagagaagagatgtttatggtgcttgg
gagcagtacctggggttggagcatgctgatactgctccaaagagatcatatgcagtaaat
cagaaccgtcacacatatgagaagccagttaagatatacaactaa
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