Fragaria vesca (woodland strawberry): 101300897
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Entry
101300897 CDS
T02666
Name
(RefSeq) probable beta-1,3-galactosyltransferase 16
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fve01003
]
101300897
Glycosyltransferases [BR:
fve01003
]
O-Glycan biosynthesis
O-linked Gal type
101300897
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Motif
Other DBs
NCBI-GeneID:
101300897
NCBI-ProteinID:
XP_004296216
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Position
LG3:24550875..24554377
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AA seq
649 aa
AA seq
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MSFYCKLQFRHLPKMRKWYGGLLIIALAMILVFRYGSIAKIEPPKQPPLQSPKQSAAEFF
GNSPDNESLGTFPEVKVIAQPKPFKKPHFVEVDGLDDLFASHDIFEESRALLVWRHLRPL
LCRSDALPETAQGVKEASIAWKDLLSIIDKDKASKLNKSEDQEDKPCPFSVNALGNIASG
DGNILEIPCGLIDDSSISLVGIPDGQSFQIQLLGSQLSEELESPVILHYNVSLPGDNMTV
EPFVIQNSWNNELGWGKEERCPSHRSASNLKVDGLVLCNEQVVRSSLDESLNVSQPSSDM
FTNVSRVSAHGDANFPFIEGNPFTATLWVGVEGFHMTVNGRHETSFAYREKLEPWSVSKV
RVAGGLNVLSALAKGLPVSEDHDLVVDVEHLKAPPLMKKRLLLLVGVFSTGNNFERRMAL
RRTWMQYEAVRSGDVAVQFFIGLHKNSPVNFELWREAQVYGDIQLMPFVDYYSLISLKTI
AICIFGTKILPAKYIMKTDDDAFVRIDEVISSLKVKANKGLLYGLISFESSPDRDKDSKW
YIGDEEWPHAGYPPWAHGPGYIISRDIGKFIVRSHHEMELKLFKLEDVAMGIWIEQFKNR
GQEVNYVTDERFYNAGCESNYILAHYQTPRLVLCLWEKLQKEHQANCCE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttattgtaagcttcagtttcgacatttaccgaaaatgaggaagtggtatgga
gggttgttgattattgctcttgctatgatattggtttttcgttacggaagcattgccaaa
attgaacccccaaagcaaccaccattgcagtcaccgaagcaatcggctgctgaattcttt
ggaaacagtcctgacaatgagtctcttgggacgtttcctgaggttaaagtgatagcacag
ccaaaaccattcaagaaaccacatttcgtagaggttgatgggctcgatgatctgtttgct
tcacatgatatcttcgaagagtcaagggccttgcttgtatggcgtcacttgcgtccccta
ctatgcaggtctgatgctttgcctgaaacagctcaaggggtaaaagaggcttcgatcgca
tggaaggacttgctttctataattgacaaggacaaggcttcaaaactgaacaaaagtgaa
gatcaagaagacaaaccctgccctttttctgtaaatgcactcggcaatatagcatcagga
gatgggaatattcttgaaatcccttgtggcctcattgatgattcttccatttctttggtt
ggcattcctgatgggcaaagctttcagattcaacttcttggctcacaactatcggaagag
ctcgagtctcctgtcatcttgcattacaatgtcagccttcctggtgacaacatgacagtg
gagccatttgttatccaaaacagttggaataatgaacttggttggggcaaagaggaaaga
tgtccctctcacagatctgctagcaatctgaaagttgatggacttgttctttgcaatgaa
caagttgtcagaagctctttggatgaatctctaaatgtgagtcagcctagtagtgacatg
ttcaccaatgtttccagggtaagtgctcatggagatgctaatttcccattcattgaaggg
aatccatttactgccacattgtgggttggtgtagagggattccacatgactgtgaacggc
aggcatgaaacatcgtttgcttatagggagaaacttgaaccgtggtcagtttccaaagtt
agagtggctggtggtttgaatgtcttatctgccttagctaaaggcttgcctgtttccgag
gatcatgatttagttgttgatgttgagcacctgaaagctccgccccttatgaagaaaagg
cttttgttattggttggggttttctcaacaggaaataattttgagcgtagaatggcattg
aggaggacttggatgcagtacgaggctgtacgttctggggatgtggctgtccaatttttc
attggccttcacaagaacagtccagtcaattttgaactgtggcgagaggctcaagtgtat
ggagatatccaactgatgccatttgttgattattacagcttgataagcctgaagacaatt
gcaatttgcatttttggtaccaaaattctccctgctaaatatatcatgaaaacagatgat
gatgcttttgttagaatagacgaggtcatctccagcctcaaggtaaaggcaaataaaggt
ctcttgtatggtctcatatcatttgaatcatcacctgacagagacaaagacagcaaatgg
tacattggtgatgaggaatggccacatgctggttacccaccatgggcacatggtccaggt
tacatcatctctagggacatcggcaaattcattgttcgtagccaccacgaaatggaactc
aagctttttaaactagaggatgttgcaatgggaatatggattgaacaattcaagaacaga
ggtcaagaagtaaattatgtcacggacgaaaggttttacaatgctggatgtgagtcaaac
tatattcttgctcattaccagacccccagattggtgttatgcctgtgggagaagctgcag
aaagagcaccaggccaactgctgtgagtaa
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