Fragaria vesca (woodland strawberry): 101301612
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Entry
101301612 CDS
T02666
Name
(RefSeq) RNA-binding protein 5
KO
K13094
RNA-binding protein 5/10
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101301612
Spliceosome [BR:
fve03041
]
Complex A
Other components
Complex A specific factors
101301612
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
101301612
NCBI-ProteinID:
XP_004306470
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Position
LG7:complement(637251..646175)
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AA seq
1062 aa
AA seq
DB search
MDSGRYGLQQGWDNNSAPEGYGAVHEPNFRVGGSYDERRFIDERYSRDNVYPRNTFHRDA
LDRDNYPPPPHAVGVGIWPHSRRRSYEDEFPVDREPRRHDKQFMDSYHEMDNLRDHEIDT
FQEFDKLRDGYHSVDTYRDPGFERTSRIGGRDRDDYAYDDFDYRSGITHKTRGDSRERDY
DYGPHSYDSDYDRSSRREGSWRRRESRDRERDKKCVSRERETSPYRRHERSRSRSRSRGH
DDRPRSRSPRSRSHGRSHREDSYDDGRYERTDKRRDRDERRQREHHSVAPSATIVVKGLS
QKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVGAARIMMDKLGDNGHVV
DGRKLFFEYSSKPTGGAGGSFGQDNAGKSGHANHKSITVPSDWMCISCGYVNFARRTSCF
QCNEARTEDAPAADISLSNQMTGKKGSEAGPTHVLVVRGLDENADEEMLRYEFSKHAPIK
DLRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGTPLERNGQILRVAYAKSILGPGSG
MSGTSQSSSLAAAAIEAATFAQQYDAVGWAPKEYNPDDKQSTGGKEQSGGDLKLQNDGLA
PQSGFVWDEASGYYYDASSGFYYDGNTGLYYDGNNGIWYSYDHQTLQYIPCTDQNGIKES
ANQSQLSKASDGSSVKKVVISAPATTSAASLPDAVQAAATAAIAAEKKEKEKSKEIKLAS
KSSILANKKKMSNVLTMWKQRSHEGQVTRVALDDNQQSAPAIDRPVSSVPSTKTKSKIDV
PTKNENTMLTSGVTATVTTADTLSLESSVMPRPVSNSIGGTLRGVIRGSGRTVVKSDTSL
SASGGVSTPSTSAAFIAGSSAPTDADISPALTPFRTDASALGSYTPPVGAGSGRRRFSEM
PASAHKEPQTGYRDRAAERRSLYGSSSSFGDDLPEHGFGESSRDLALRKGSFDSMPFPPG
VGGGRATGDAAIDSYEVITADKAIDESNVGNKMLRSMGWHEGLGLGRDGSGMVEPVQAQS
VERRAGLGSQQKKLDPALEAQAGDSYKTLIHKKALARFREMS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggattccggtcgctacggtcttcagcaaggatgggataataacagcgctccggagggt
tatggtgcagttcacgagccaaactttcgggttggtggttcatatgatgagaggaggttt
atagacgaaagatactcaagggacaatgtttatccaagaaacacattccaccgtgatgcc
ctggatagggataactacccaccaccacctcatgctgttggtgttggtatatggccacat
tcaagaaggagaagttatgaagatgaatttccagttgatagggaacctaggagacatgat
aaacagttcatggattcatatcatgagatggataacctccgtgatcacgagatcgataca
tttcaggaatttgataaattacgagatggctatcacagtgttgacacctatcgtgatcct
gggtttgagaggacttcaaggattgggggacgtgatcgtgatgattatgcatatgatgat
ttcgactataggtccggtattacccataagacccggggggacagtcgtgagagagattat
gactatggtccacatagttatgattctgattatgacagaagtagtaggagagagggcagc
tggaggcgtcgtgaatctcgtgaccgtgagcgtgacaagaagtgcgtaagtagggaaaga
gaaacaagtccatatagaaggcatgagcgttctagatctcggtcccgatctcgtgggcat
gatgatcgtcccagatcaagatcacctagaagtcgaagccatggccgaagtcatcgagag
gacagctatgatgatggacggtatgagaggaccgataaacgaagagacagggatgagaga
cgccagagagaacatcattctgtggccccatctgcaactattgttgtgaagggtctttca
cagaagactactgaggaagatctataccagatccttgctgaatggggacctcttcgtcat
gtccgtgtgatcaaagaacgtaattccggcatttcccgtggatttgcatttattgatttc
ccttccgtgggagcagcacgaattatgatggacaaacttggggacaatgggcatgtcgtg
gatgggaggaaacttttttttgagtacagcagcaagccgactgggggtgcaggtggatct
tttggccaggacaatgctgggaaatctggccatgcgaaccataaaagcatcacagtgcca
tctgattggatgtgtattagctgtggatatgttaattttgcacgacggacatcctgcttt
cagtgtaatgaggcacgaactgaggatgctcccgcagcagatatatctttatccaatcaa
atgacaggaaagaaaggatcagaggctggtcctactcatgttttggttgttcgtggactg
gatgaaaatgctgatgaggaaatgcttcgctatgagttttctaaacatgctcctatcaag
gatcttcgtcttgtcagagacaaattcactcatgtttcacggggatttgcgtttgtgcat
ttccattcggtggaagatgctacaaaagctcttgaagcaacaaatggaacaccacttgaa
aggaatgggcagattttaagagtagcatatgcaaaaagcattcttggtccaggatcaggc
atgtcgggaacttcacagtcaagcagcttggcagctgctgcaattgaggcagcaacattt
gctcaacagtatgatgctgttggatgggcaccaaaggaatataatccagatgacaaacaa
tccacgggagggaaggagcaaagtggtggggacttgaaactacaaaatgatggtttggcg
ccacaatctggttttgtatgggatgaggcatccggttactactacgacgcctcttccggg
ttctactatgacggaaatacaggtctttattatgacggtaacaacgggatttggtattct
tatgatcaccaaactctgcaatacatcccttgcactgatcagaatggcatcaaagaatct
gctaatcaatctcagctttcgaaggcttcagatggttcaagtgtaaaaaaagtagtcatc
tctgcaccggctacaacctcagctgcatcgctacccgatgcagtccaggctgctgcaaca
gcagcaatagctgcagagaaaaaagaaaaggaaaagtccaaagagatcaagttggcttca
aagagcagtattttggctaacaagaagaaaatgagtaatgtattgaccatgtggaaacag
aggagtcatgaagggcaagtaactcgtgtagctctggatgataaccagcaaagtgcacca
gccatagatagacctgtttcttctgttccatctacaaagacaaagtctaaaattgatgtg
ccaaccaaaaatgagaatactatgttgacttcaggggttactgccactgttactactgca
gatactctcagtttagagtcttcagtcatgccaaggcctgtgagcaacagtatagggggg
acactaaggggagtgataaggggatctggaagaactgtggttaaatcagatacatccctt
tcagcatctggcggagtttccacaccttcaacttctgctgcattcatagcaggttcttct
gcaccaacagatgcagatatctctccagctttgacacccttcagaactgatgcatctgca
ttaggttcttatacaccacctgtgggtgctgggagtggcaggagacgattttccgaaatg
ccagcttctgctcataaagaacctcaaactggatacagggatcgtgctgctgaaaggagg
agcttgtatggctcgtcatcttcttttggagatgatttgcctgaacatggttttggggag
tcaagtcgagacttggcattgaggaagggttcttttgattcaatgcctttcccccctggt
gttggtggaggacgtgctactggagatgctgccattgacagttacgaggtaattacagcc
gataaagctattgatgagagcaatgtgggcaacaagatgcttcgcagcatgggctggcac
gaaggcttgggtttagggagagatgggagtggaatggtagaaccggtgcaggctcagagt
gtggaaaggagagccggacttgggagtcaacagaagaagttagatcctgccctcgaggct
caggctggagatagttataaaactctcattcacaagaaggcactggctaggttccgggag
atgtcttag
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integrated database retrieval system