Fragaria vesca (woodland strawberry): 101302012
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Entry
101302012 CDS
T02666
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101302012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101302012
04147 Exosome [BR:
fve04147
]
101302012
04090 CD molecules [BR:
fve04090
]
101302012
Enzymes [BR:
fve01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
101302012
Transporters [BR:
fve02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101302012
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101302012
CD molecules [BR:
fve04090
]
Proteins
101302012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_16
RsgA_GTPase
DUF87
AAA_30
Fijivirus_P9-2
Motif
Other DBs
NCBI-GeneID:
101302012
NCBI-ProteinID:
XP_004307559
LinkDB
All DBs
Position
LG7:complement(17103749..17111415)
Genome browser
AA seq
1407 aa
AA seq
DB search
MMINRGLFGWSPPHVQPLTPVSEVSEPPESPSPYMDMSGDTSAQPVEQEEEMEEPEEIEP
PAAAVPFSKLFTCADRLDWVLMTVGSLAAAAHGTALVVYLHFFAKIIHVLWLDKGGPPEK
VAEEQYQKFMELALSIVYIAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSF
FDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLIIGFINCWQIAAITLAT
GPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIGTLYAFTNETLAKYSYATSL
QATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHRKAHGGEIITALFAVILS
GLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSIVNHEGTTLVAVQGNIEFRNVYFSYLS
RPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKL
EWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFITSLEGSYETQV
GRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERTVQEALDLLMLGRSTII
IARRLSLIRNADYIAVMEEGQLVETGTHEELITHDGLYAELLKCEEAAKLPRRMPVRNYK
ENTAFQIEMDSSASNNFQEPSSPKMMKSPSLQRVTGMFRMGDSNFNAQDSPKPKSPPSEN
VLENGQQPLDTADKEPTIKRQDSFEMRLPELPKLDVQSANQQTTNGSDPESPVSPLLTSD
PKNERSHSQTFSRPHSHSDDVPIKVKGSKSTHYKKSPSFWRLAELSFAEWLYAVLGSIGA
AIFGSFNPLLAYVIALVVTAYYRVNEGHHLSPEVDKWCLIIACMGIVTVVANFLQHFYFG
IMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQ
DSAAIIVAVLIGMLLQWRLALVALATLPVLTISAIAQKLWLAGFSRGIQEMHRKASLVLE
DAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLW
YTAYSVKKKYMELPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKI
EPDESSAMKPPNVYGSLELKNVDFCYPTRPELLVLSNFSLKVNGGQTVAVVGVSGSGKST
IISLIERFYDPVAGQVMLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNA
SEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLD
EASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDS
LMSKNGLYVRLMQPHFGKGLRQHRPLV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaacagggggctgttcgggtggtccccgccgcacgtgcagccactgacgccg
gtgtcggaggtttccgagccgccggagtcgccgtcgccgtacatggacatgagcggggac
acgtcggcgcagccggtggagcaggaggaggagatggaggagccggaggagatcgagccg
ccggcggctgccgtgccgttctcgaagctgttcacttgcgccgaccggctcgattgggtt
ttgatgaccgtcggatcgctggcggccgccgcgcacgggacggcgttggtggtgtacttg
cacttttttgcgaagattattcacgtgctttggctcgataagggagggccgccggaaaaa
gtggcggaggagcagtatcagaagtttatggaacttgctttaagtattgtatatatcgct
gtgggtgtgtttgctgctggttggattgaggtctcatgctggattctgacgggagaacgg
cagactgctgttatcaggtcaaaatatgttcaagtattacttaaccaggatatgagtttt
ttcgatacctatgggaacaatggggacatcgtgagccaagttttgagtgacgttctactc
attcagtctgctcttagtgaaaaagttggaaattatattcataacatggcgacatttttc
agtggtctcattattggattcatcaactgttggcagattgcggctataacgttagccact
ggtccatttattgttgctgctggaggaatatcaaatatatttcttcataggcttgctgag
aatattcaagatgcatatgctgaagcagctagcattgccgagcaggcagtttcatacatt
ggaacattatatgcatttaccaatgaaacattggccaagtattcttatgcaacatcacta
caagcaactcttcgatatggtatattgattagtctggtgcaaggacttggacttggattt
acgtatggacttgctatttgttcatgtgccttgcaactctgggttggaaggttcctggtt
actcatagaaaagctcatggtggtgaaattataacagctttatttgctgtgatattaagt
ggccttgggctaaaccaagcagcaacaaacttctactcatttgatcaaggtcgaattgca
gcttatagactgtttgagatgataagtcgatcatcctccattgttaatcatgagggaact
accctagtggctgtacaaggaaatattgagttccggaatgtgtatttcagttatctatct
cgtccggagattcctattttgagtggtttttacctctctgtacctgcaaagaaagctgtg
gctctagtgggcagaaatggatctggaaagagcagtatcattcctctcatggagcggttt
tatgacccaacattaggagaagttcttttggatggagaaaatataaaaaacttgaaattg
gaatggctcagaagccagatagggctagttacgcaggagcctgccttgttaagtttgagt
ataagagataatattgcttatgggcgggatgcgacaatggatcaaattgaagaagctgct
aaaatagcgcatgcacatacatttattacttcacttgagggatcatatgaaacacaggtg
ggaagggcaggattagcattgacagaggagcaaaaaataaaactttcaattgccagagca
gtccttctgaatccatcaattcttctgcttgatgaggtcactggtggacttgattttgaa
gcagaaagaactgttcaagaggctcttgatctcctcatgttgggacgttcaactataatt
atagctcggcgacttagtcttataaggaatgctgattacatagctgtgatggaggaaggt
caactagttgaaacaggtacacatgaagagttaataacccacgatggcctatatgcagag
cttctcaaatgtgaagaagctgcaaagcttcccagaagaatgccagttcggaactacaag
gagaatacagctttccaaattgagatggattcttcagcaagtaataacttccaagaaccg
tcatccccaaaaatgatgaagtcaccctcactccagagggtcactggtatgtttcggatg
ggtgatagcaattttaatgcacaggactcaccaaaacctaagagtccaccatcagagaat
gtgctggaaaacggtcagcaacccttggatacagcagataaggaaccaacaataaagagg
caggatagttttgaaatgagactaccagaattacccaagcttgatgtgcagtctgcaaat
caacaaacgacaaatggttcggaccctgaatcccctgtttcaccccttttgacatctgat
ccgaagaatgaacgttcccattcacaaaccttcagccgccctcatagccattctgatgat
gttccaataaaagtgaagggatcaaagagtacacattataaaaagtcaccatcattttgg
aggcttgcagagcttagttttgcagagtggctttatgctgtgttaggaagcattggtgct
gcgatctttggttcttttaatcctcttcttgcctatgtcatcgcacttgtagtaacagca
tactacagggttaatgaaggtcatcacttgagtccggaggtagacaaatggtgcttgatc
attgcttgcatgggaatagtgactgtcgttgccaatttcttacaacacttctactttggt
atcatgggggagaaaatgactgaacgcgttcgtagaatgatgttttcagcaatgctccgc
aatgaggtgggatggtttgatgaagaagaaaacagtgctgataccttgtccatgcgcttg
gcaaatgatgctacatttgtgcgagctgcttttagtaataggctttcaatattcatacag
gacagtgctgctatcattgtggctgttcttattgggatgttgctacaatggcgattagca
cttgtggctttggcaaccctacctgttctcactatttctgccattgcacagaaattatgg
ctggctggtttttccagggggattcaggagatgcacaggaaagcatctttggttctcgag
gatgcagttagaaacatttacactgtggtagcgttctgtgctggtaacaaggtaatggag
ctctacagattgcagcttaagaaaatctttaagcagagtttcttacatggaatggccatc
gggtttgcatttggattttcgcagttcctcctttttgcctgtaatgcccttctcctctgg
tacacagcatattctgtgaaaaagaagtatatggaactccctactgctctgaaggagtat
atggttttctcttttgcaacttttgcactggtagagcctttcggattggctccttacata
ctcaaaaggcgtaaatcactcatatcagtatttgaaatcatagatcgagtgccaaagatt
gagccagatgaaagctccgccatgaaaccacctaatgtttatggaagccttgagttgaaa
aatgttgatttctgttatccaactcgcccagaactattggtgctgagcaatttcagtctc
aaagtaaatggcgggcaaactgtagctgtggtgggagtttcagggtcgggtaagagcact
ataatttctttgatcgagagattttatgatccagttgctggtcaagtgatgctagatggt
cgagatctgaagctttataatttgagatggttgaggaatcacctaggtcttgttcaacag
gagcccattattttctcgacaaccataagggagaatataatatatgcaaggcataatgct
agtgaagctgaaatgaaagaggctgcaagaatagcaaatgctcatcatttcatcagcagc
ttgcctcatggttatgatacacatgtggggatgagaggtgttgatctgaccccaggacag
aagcagagaattgcaatcgctcgtgttgttttgaagaatgctcccatcttgttattggat
gaagcaagttcgtccatcgaatctgagtcaagtcgagtggtacaggaggctcttgataca
ttaatcatggggaacaaaacaaccattttgatagctcacagagctgcaatgatgagacat
gttgacaacattgtagtccttaatggagggagaattgtggaagaagggtcccatgattct
ttgatgtcaaagaatggtctgtatgtccgtttgatgcagcctcactttggcaagggtttg
cgtcagcaccgccccctcgtttag
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integrated database retrieval system
