Fragaria vesca (woodland strawberry): 101303852
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Entry
101303852 CDS
T02666
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101303852
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101303852
04147 Exosome [BR:
fve04147
]
101303852
04090 CD molecules [BR:
fve04090
]
101303852
Enzymes [BR:
fve01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
101303852
Transporters [BR:
fve02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101303852
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101303852
CD molecules [BR:
fve04090
]
Proteins
101303852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
AAA_21
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_24
PRK
AAA_30
DUF815
Motif
Other DBs
NCBI-GeneID:
101303852
NCBI-ProteinID:
XP_004288891
LinkDB
All DBs
Position
LG1:complement(4954092..4959826)
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AA seq
1250 aa
AA seq
DB search
MDSPGKNERHEKEEKKKKSADSVFTIFRYADWVDVVLMVFGTIGAIGDGMSTNCLLLFAS
RLMNNLGYGQNQMQQNNNHGNWMDEVEKCSLYFVYLGLAVMLVAFLEGYCWSKTSERQVL
KIRYKYLEAVLRQEVGFFDSQEATTSEVINSISKDTSHLQEVLSEKVPIFFMHTSVFVSG
LVFSTFMSWRLSLVAFPTLLLLIIPGMIYGKYLLYLSKQSYMEYGKANTIVEQALSSIKT
VYSFTAERTIVERYSAILERTSRLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYR
GESGGRIYAAGISFVLSGLSLGMALPDLRHFTEASIAASRIFDRIDRKPLIDGEDTKGIV
LNNIRGELEFIDVRFTYPSRPDSIVLKDFNLKVEAGKTIALVGASGSGKSTAIALVQRFY
DADCGVVRIDGVDIKTLQLKWIRSKMGLVSQEHALFGTSIKENIMFGKLDANMDEVTAAA
MAANAHNFIRQLPEGYETKIGERGSLLSGGQKQRIAIARAIIKNPIILLLDEATSALDSE
SETLVQNALDQASMGRTTLVVAHKLSTVRNADLIAVVSGGCIIEIGSHNDLINRQNGQYA
KLAKMQRQFSTFDNVDQDQNSDTRLSSVARSSAGRLSTARSSPAMFAKSPLAIETPQSAV
LSHPPTSFYRLLSLNSPEWKQGLIGSLSAIAFGSVQPIYALTVGGMISAFFVQSHEEMRA
RIRTYSLIFSALSLVSMTLNLLQHYNFAYMGEQLTKRIRLKMLQKILTFETAWFDEEHNT
SGQLCSRLSNEASMVKSLVADRVSLLVQTTSAVTIAMILGLIVAWKLALVMIAVQPLTIL
CFYTKKVLLSSLSANFVKAQNHSTQIAVEAVYNHRIVTSFGSVGKVLQIFDKAQEAPRKE
ARKKAWLAGIGMGSAQCLTFMSWALDFWYGGKLVKMGQISAGDVFKTFFILVSTGKVIAE
AGSMTSDLAKGATAVASVFEILDRHSLIPGSHNVGYEDGTSGIKLEKVAGKIEMRKVDFA
YPSRPETLVLRQFSLEVKAGTSIGLVGKSGCGKSTVIGLIQRFYDVERGSVKVDGVDIRE
LDVQWYRKHTALVSQEPVIYSGTIRDNIMFGKLDASENEVAEAARAANAHEFISALKEGY
ETECGERGVQLSGGQKQRIAIARAILRNPTILLLDEATSALDVQSEHLVQEALDRIMVGR
TTIVIAHRLNTIKNLEMIAFVEDGKVIEKGTFAQLKHKRGAFFNLASCQT
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggattctccagggaagaatgagaggcatgagaaagaagagaagaagaagaagtccgca
gattcagtattcacaattttcagatatgctgattgggttgatgttgtgctaatggttttc
ggaaccatcggagctatcggagatggcatgtctactaactgtttgctgctctttgctagc
cgtcttatgaacaacttggggtacggtcagaatcagatgcaacagaataataatcatggg
aactggatggacgaggttgaaaagtgcagtttatactttgtatacttgggattagcagta
atgctggtggcttttttggaaggttattgttggagcaaaaccagcgagaggcaggtgctg
aagattcgttacaagtacttggaagctgttcttagacaagaagttgggtttttcgattca
caggaagcaactacttcggaggtgatcaacagtatatccaaagatacgtctcatttacag
gaagttctgagtgaaaaggtgccgatattttttatgcacacgtcagtgttcgtctcaggg
cttgttttctccactttcatgtcttggagactgtccttagtcgcatttccaacactactt
ctcctgatcataccgggaatgatctatggaaaataccttctttatttgtctaaacagtca
tacatggagtatggaaaagcaaacaccattgtggagcaagctctgagctccattaaaaca
gtctattcattcacagctgagaggacaattgtggagaggtactcagcaatattggagaga
acaagcaggctggggatcaagcaagggattgcaaaaggtcttgccgtaggaagcacaggg
ctgtcatttgcaatatgggcatttctggcttggtatggtagccatttggtgatgtataga
ggcgaaagtggtggtcgaatctatgctgctggcatctccttcgtattgagtggactatcc
ttgggaatggcacttccagatttgaggcacttcacagaagcttccattgctgcatcacgc
atatttgataggattgaccgaaaaccattgattgatggtgaagacacaaaaggaattgtg
ttgaacaacattagaggtgaactcgaattcatagatgtcagattcacatacccttctcgt
ccggattccattgtcctcaaagatttcaatctcaaagttgaagcagggaaaacaattgca
ctagttggagccagtggaagtggcaaatccacagcaattgcattggtgcaacgcttttat
gatgcagattgtggagttgttcggattgatggtgtcgatataaagacacttcaattgaag
tggataagatcgaaaatgggacttgttagtcaagaacatgccttatttggtacatcaata
aaggaaaatatcatgtttgggaagcttgatgccaatatggatgaagtcacagctgcagcc
atggctgccaatgctcacaatttcataaggcagcttcctgaagggtatgaaaccaagatt
ggagagcgaggatcacttttatctgggggacaaaagcagcggatagccattgctagagca
attatcaagaaccctataattctcttactagatgaagcaacaagtgctcttgattctgag
tcagagacactggtccaaaatgctcttgaccaagcctccatgggaagaaccacattggtg
gtagctcacaagctttctacagttcgaaatgctgacctcattgcggtggtcagtggaggt
tgcattatcgaaataggttcgcacaacgaccttatcaaccgtcaaaatgggcagtatgca
aagctagcaaagatgcagaggcagttcagcacctttgataatgtagaccaagaccagaat
tctgatacacgcttgtcttcggttgcaagaagtagtgctggcaggttaagcacagcaaga
tcaagccctgcaatgtttgcaaaatcaccactagcaattgagaccccacaatctgcagta
ctgtctcatcccccaacttccttctaccgccttctctctttaaactcccctgaatggaag
caaggcctaattggaagcctctcggcgatagcctttggctcagtccaacctatctatgcc
ctcactgtggggggcatgatttcagctttctttgtgcaaagccatgaggaaatgcgtgca
agaattcgaacatattcattgattttctctgcactttccttggtctccatgacattgaat
cttttgcaacattacaattttgcttatatgggtgagcagctaactaaaagaatccgattg
aaaatgctacaaaagatcttgacctttgagacagcttggtttgatgaggagcacaacaca
agcgggcaattgtgttcaagattgagcaatgaggcttccatggtgaagtcgcttgtggca
gacagggtctctttgttggtccaaaccacttcagccgtcacaattgctatgatattggga
ctaattgtggcttggaagctagcacttgttatgattgcggtccaaccactcacaattctt
tgcttctacaccaagaaagtgttgctctctagcctttcagccaattttgtcaaggcacaa
aaccatagcacccaaattgcagtagaagctgtctataaccatagaattgtgacttcattt
ggaagtgtagggaaagtgctacaaatatttgacaaagctcaagaggcgccgagaaaagag
gcaaggaagaaggcatggctggctgggattggaatggggtcagctcagtgcttaacattt
atgtcatgggcattggacttttggtatggtggtaaactagtcaaaatgggacaaatatca
gctggggatgtgttcaaaacatttttcatattggttagtactggtaaggttatagcagaa
gctgggagtatgacttctgatttagccaagggtgctactgcagttgcatctgtgtttgag
attcttgacaggcattcactgataccagggtcacataatgttggctatgaagatggtact
agtggaatcaagttagagaaagtagcaggcaagatagaaatgaggaaagttgactttgca
tatccaagcaggccagagaccctagtgttgcggcagtttagcttggaggtcaaggcaggc
acaagcattggacttgttgggaaaagtgggtgcggtaaatcaactgtcattggactgata
caaaggttttatgatgttgagagggggtcagtgaaggtagatggagttgatataagggag
ctagatgttcaatggtataggaagcacactgcccttgttagccaagaaccagtgatatat
tcaggcaccatccgcgataacataatgtttgggaaacttgatgcttcagaaaatgaggta
gcagaggctgccagagctgccaacgctcacgaattcatctcagccttgaaagaaggatat
gagacagaatgtggtgaaagaggagtgcagctatcaggagggcaaaagcaaagaatagca
attgcaagagcaatacttaggaaccctacaatactattgctagatgaggcaacaagtgct
cttgatgtgcaatcagagcaccttgtgcaggaagcactggaccgaatcatggttggaaga
accacaattgtgatagcacatcgacttaacaccataaaaaacctcgagatgattgccttt
gtcgaagatgggaaggttatagagaaaggcacttttgctcagctcaagcacaagcgcggt
gccttcttcaaccttgctagctgtcaaacttaa
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