Fragaria vesca (woodland strawberry): 101304455
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Entry
101304455 CDS
T02666
Name
(RefSeq) protein ROS1-like
Organism
fve
Fragaria vesca (woodland strawberry)
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Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
101304455
NCBI-ProteinID:
XP_011460268
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Position
LG3:3190621..3199945
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AA seq
1659 aa
AA seq
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MDMNEQRKDALHDWASCIAPTTLDSPNLPKVSQQHRHHEFYKFPFALQPIEGNNGTGPGG
AGNTLEMSREVPCIHLLALVHAASSAAQKTAVMHGEHQYDFPCHLPCDLNSAPETTFGQF
APITPEKASSNVDHRKNQQIEEQMNAGATSCEIFEQRNNKDVANPATDFSHATPSTQLQE
NSINKEGDNSIDLNQTPQLKQRRRKHRPKVIREGKPKPTPKPPTTKETPVRRKYVRKNAL
DKNATPPPPKELGECTDLTKPKSTKRSCRRVLNYDMKDPGDDISSLQKDTATLYPARKSS
MEGREYVDCQKDTAEGKATVRAQIGHKNAVETELDGDTSSSLQRPNDSNCSSSMILTQEN
EQLNGSKRKYSSAVEQTEPRPQNFLGVHYNNMPAYENMMSYMHFPYIYKKRRTDKGCASI
ISSTSCHVTMAENVWRQSELQDVETILPSYRTQSSKRRRSKAPTRFRDLASLIRTPEHIL
LQSTCLTKPPADVNWQRAMNCNSTQTCMDALVPEVGDTLAKKKRTKRSTLTSSHRSLVLY
KNQPLVSGSSGVPPEVACTQILSVDAIADQLKCLNINRESSKFAYQGYNVVYNTQDQENN
ALVLYRRDGTVVPIEGAFDPIKKRRPRPKVDLDEETDKVWKLLMDNINSEGADGTDEQKA
KWWEEERRVFKGRADFFIARMHLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFM
SLAAHFPLKSVNNQNASDEKVASLAVDEPEVCTSEISNQPLCDFSSVTFHDTEHSEEQVV
NSSENTETTSEGVISTNEPDCKLTPSLVNGSATKNPRTASECYIEEDLRKRCDIVSSQNS
VDSSTSQTVEKTGLCESNSETEDAPDTCQNGSLDHSTLFLQKAEVHSVRNSHLSPHDNLN
CELHEPICMQHDDERIFIESGGASQDASNNCCIHNIPNPEVVQVECSELFEEVIHSSNIS
KNKYEDSPGEQSVLTAESVSQDTTSNKLTVNDQDAQRCFSESCTCIQEKSNMIQSQFRVG
GNPNKVYVPAEKHTSKIQQSCNISEETTDIMHKEPESDLSFNEVSNVDAATSKTKNRRPG
KDKKAQQDWDKLRERAEPNGRKREKTANTMDSVDWEAVRTANVNDIAQTIKERGMNNKLA
ERIKEFLNRLLREHGNVDLEWLRDVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFPV
DTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQM
ITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEEKSIVSATEDRNTYRNPG
EINNKIPLPIPLPLPLPHPHPTEQLGGNQQLEASQQSRPKSAPGYTEPIIEEPVSPEPEC
TQIVEDIEDFYEDPDEIPTIKLNMEQFTQNLQNYMQQNMELQQGEMSKALVALTPDAASL
PTPKLKNVSRLRTEHQVYELPDSHPLLDRLGLDKREPDDPCNYLLAIWTPGETANSIQPP
ENRCSSQEFGKLCDDKQCFQCNSAREAHSQTVRGTLLVPCRTAMRGSFPLNGTYFQVNEV
FADHDSSLEPLDVPRGWLWNLNRRTVYFGTSIPTIFKGLTTPEIQHCFWRGFVCVRGFDQ
KSRGPRPLMARLHFPVSRLAKPKGKKEELPSQNFQKKYA
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaatgagcagaggaaagatgccttacatgattgggcttcttgcattgctcca
acaactcttgacagtcctaatctcccaaaagtttcccagcaacatagacaccatgaattt
tataaattcccgtttgcgttacaacccattgaagggaataatggaactggacctggtggt
gctggcaacacactcgagatgtcgagagaggttccttgtatacatctcctggcccttgtg
catgctgcctctagtgctgcacagaaaactgctgtcatgcatggagaacatcagtatgat
tttccctgccaccttccttgtgatctgaattcagcacctgagaccacctttggccaattt
gcacccataacaccagagaaggcaagctcaaatgtggatcatagaaaaaaccagcaaata
gaagagcagatgaatgctggtgctacctcatgtgaaatcttcgagcagagaaataataaa
gatgtagcaaaccctgctacagatttttcacatgctactccttccacacagctccaggag
aatagcatcaacaaggaaggggacaatagcattgacttgaatcagacaccgcagctgaaa
caaaggaggagaaagcacaggcccaaggtgattagagaaggcaaaccaaagccaacaccg
aaacctcccactactaaggaaactcctgtcagaagaaagtatgtgaggaagaatgcacta
gacaaaaatgcaactcctcccccaccaaaggaactgggagagtgcaccgatttaactaaa
ccaaaatctaccaagagatcatgcagaagggtgttgaattatgacatgaaagatccagga
gatgacatatcctctttacagaaagacactgccacactgtaccctgccagaaaaagttcc
atggagggaagagagtatgttgattgtcaaaaagacactgcagaaggaaaagcgacagtg
agagctcaaattggtcataaaaatgctgtagaaactgagttggatggtgacactagttcc
tctttacaaaggccaaatgactctaactgcagctcatccatgattctgacacaagaaaat
gaacaactgaatggatccaagagaaaatattctagtgctgttgagcagacagagcccaga
ccccaaaattttctcggagttcactacaataatatgccagcatatgagaacatgatgtct
tatatgcattttccatacatatacaagaagaggaggacagataagggatgtgcttctatc
atatccagcacatcatgtcatgtgactatggcagaaaatgtttggagacaatcagaactg
caagatgttgagactatcctgccttcatatcgaacacaaagttcaaaaaggagaagatca
aaagctccaacacggtttcgtgacttggcttctctaattagaacaccagagcacattctg
ctccagagtacctgtctcacgaaaccaccggctgatgttaattggcaaagagcaatgaac
tgtaactcaactcagacatgcatggatgccctagtccctgaagtgggtgacacactagca
aagaaaaagagaacaaaaagaagcactcttaccagttcacaccgaagtcttgtgctatac
aagaaccaaccattagtttctggatcatcaggtgttccaccagaagtagcatgcacgcaa
atactttctgttgatgctattgctgatcaattaaaatgtttgaacataaatagagaaagc
agcaaatttgcatatcaggggtataatgttgtctataatacacaagatcaagagaacaat
gcattggttctttatagaagagatggcactgttgtaccaattgagggggcgtttgatcct
atcaagaaacgccggccacgacctaaagttgaccttgatgaagagactgataaagtatgg
aagctgctaatggataacatcaacagtgaaggcgctgatggaacggatgaacagaaagca
aaatggtgggaagaagagcgtagagtgttcaaaggtcgtgctgacttttttatcgcacga
atgcatcttgtgcaaggagatagacgcttctctccatggaaaggatcagttgtggactcg
gtggtaggagtttttctgactcaaaatgtatcagaccatctgtctagctctgcattcatg
tcgcttgctgcacattttcccctgaagtcagtgaacaaccaaaatgcatccgatgaaaaa
gttgcgagcttagcagtagatgaaccagaagtgtgcactagtgagatttcaaaccagcca
ctttgtgattttagttccgtaacattccatgacactgagcatagtgaagaacaagttgtc
aacagcagtgagaacacagaaaccactagtgagggagttatctctacaaatgaacccgac
tgcaagttaacaccttcattggttaacgggtccgccaccaagaacccaagaacagcatca
gaatgttacatagaggaagacttgagaaaacgatgtgatatagtttcatctcaaaattct
gtggattcttcaacttctcagactgtggaaaaaacaggattatgtgagagcaactcagag
acagaggacgcacctgatacatgtcaaaatggcagtttggatcattccactttgttttta
cagaaggccgaagtccacagtgtcagaaacagccatttgtcacctcatgacaatttgaat
tgtgaacttcatgagccgatatgcatgcagcatgatgacgaaagaatatttatagagagc
ggtggagcatcccaggacgcttccaataattgctgtatacataacatccccaacccagaa
gtagtgcaagttgagtgctctgaattgtttgaagaggtaatccattcttctaatatttcc
aagaacaaatatgaagacagtccgggggaacagagtgtactaacagcagaatctgtgagt
caagatacaacaagtaataagcttactgtcaatgatcaagatgcacagagatgtttcagt
gaatcatgcacttgcattcaagaaaaaagtaacatgattcagtctcaattcagggttggt
gggaacccaaataaggtttacgtacctgctgagaagcatacaagtaagattcagcaaagt
tgcaacatttctgaagagaccacagatattatgcataaggaacctgagtcagatttaagc
ttcaacgaagtcagtaatgtggatgctgctacctcaaagacaaagaacagaagacctgga
aaagacaaaaaggctcagcaggactgggataaattaagagaacgagcagaaccaaatgga
agaaaaagggaaaaaacagcaaacacaatggattccgtggactgggaagctgtaagaact
gcaaatgtgaatgacattgcccaaactatcaaagaaagggggatgaataataagcttgca
gaaagaatcaaggaattccttaaccggttacttagagaacatgggaatgttgatcttgaa
tggttgcgggatgttccacctgaccaagcaaaagagtatctgctgagcttccgtggactg
gggctaaaaagcgtggagtgtgtgaggcttttaacacttcaccatcttgcttttccggtc
gatacaaatgttggacgtatagctgtacggctgggatgggtacctcttcagcccttgccc
gagtcactgcagttgcatcttctagaactgtacccggtgctggaatccatacagaagtac
ttgtggccaagactttgcaagcttgaccaaagaaccttgtatgagctgcactaccagatg
ataacatttggaaaggtcttctgcacgaaaagcaaaccaaattgcaatgcatgtccaatg
agaggagaatgtagacattttgcgagcgcatttgcaagtgcaagacttgccttgccaggg
cccgaggagaaaagtatagtgagtgcaacagaagatagaaatacgtatcgaaatcctggt
gagatcaacaacaaaattcctctacctatccctctccctctccctctccctcatcctcac
ccaacagaacagttgggaggaaaccagcaacttgaagcaagccaacaatcaagaccaaag
tctgcacctggttatactgaacctattattgaagagccagtatcaccagaaccagagtgc
acacagatagtagaagacattgaggatttctatgaggacccagatgaaattcctacaatt
aaacttaacatggaacagttcactcagaacttgcaaaattatatgcaacaaaacatggaa
cttcaacaaggagaaatgtcaaaggcattagttgctctaacaccagacgctgcatccctt
cctacacctaagcttaagaatgtgagccgactacgaactgagcaccaagtctatgaactt
cctgactcacaccctcttctagatcgattggggttggataagcgagaacctgatgatcca
tgcaattaccttttggccatttggacaccaggtgaaacagcaaactccattcaacctcca
gagaataggtgtagttctcaagaattcggcaagttgtgtgacgataagcaatgtttccaa
tgcaatagtgcacgggaagcacattcacaaacagttcgagggactctcttggtaccatgc
cgaacagcaatgagagggagcttcccacttaacggcacctactttcaagttaacgaggta
tttgctgatcatgattcgagccttgagcctcttgatgttccaagaggctggttgtggaat
ctgaataggagaactgtgtacttcggaacctcaataccgacaatattcaaagggttaaca
acaccagaaattcaacattgcttttggagaggatttgtgtgcgtgagggggtttgatcag
aaatcaagaggtccacgtcctttaatggcccggctgcacttcccagtcagcaggttggcc
aaaccaaaaggcaagaaagaggagttgccatcccaaaattttcaaaaaaagtatgcctag
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integrated database retrieval system
