Fragaria vesca (woodland strawberry): 101306304
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Entry
101306304 CDS
T02666
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101306304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101306304
04147 Exosome [BR:
fve04147
]
101306304
04090 CD molecules [BR:
fve04090
]
101306304
Enzymes [BR:
fve01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
101306304
Transporters [BR:
fve02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101306304
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101306304
CD molecules [BR:
fve04090
]
Proteins
101306304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
AAA_16
SMC_N
AAA_22
P-loop_TraG
ABC_ATPase
AAA_30
RsgA_GTPase
Zeta_toxin
AAA_23
AAA_21
AAA_33
AAA_24
nSTAND1
DUF87
DUF3987
NicO
Motif
Other DBs
NCBI-GeneID:
101306304
NCBI-ProteinID:
XP_011459839
LinkDB
All DBs
Position
LG2:complement(23155066..23164508)
Genome browser
AA seq
1390 aa
AA seq
DB search
MEEVELASNSSEVSGTNPHPKMPQPMHSNTQNLGSVSFLGLFAAADQMDYILMLFGSFGS
CIHGAAFPVFFVLFGGMIDSLGHMAMRSNEMSSRISEYALYVVCLGIVLFISAWIGVASW
TRTGERQTARLRLKYLQSVLRKDISFFDTEARDANIIFHISSDTILVQDAIGDKTGHTLR
YLSQFVVGFVIGFTSVWQLTLLTLAVVPLIAIAGGAYTIIMSTLSEKGEAAYAEAGKVAE
EVISQIRTVYSFVGEDKAIETYSESLNKALKLGKKSGVAKGVGVGFTYGLLFSAWAMLLW
YAGIMVRHHDTNGGKAFTMIINVIFSGFALGQATPNLAAISKGRAAAANIMNMIESDSNS
SNVSDKGVVLPKVTGKIEFCDVSFAYPSRPNVVFENLSFSISAGRTFAVVGPSGSGKSTI
ISMVQRFYNPSSGKILLDGNDVSTLQLRWLREQMGLVSQEPALFATTIADNILFGKEDAG
MDEIIEAAKAANAHSFIQGLPDGYKTQAGEGGTQLSGGQKQRIAIARAVLRNPKXLLLDE
ATSALDFVLIVTALCIAETLALAPDIVKGSQALGPIFRILKRETAIHSNDPTTNVVADIR
GDIEFRNVSFHYPARSDITIFDNLNLRVSAGKSLAVVGPSGSGKSTVIALVMRFYDPISG
AVIIDGHDIKGLNLKSLRKKIGLVQQEPALFSTTVYDNIKYGNEEASEVEVTRAAEAANA
HEFISRMPEGFKTQVGEKGVQLSGGEKQRVAIARAILKDPSILLLDEATSALDTESEKLV
QESLDKLMEGRTTILVAHRLSTIRDANKIALLQNGRVVEMGSHEQLIGTPGSLYKQLVRL
QQEKSEQNVSRYYTHCFLEELSTKELLKKMRATTSANWYTMEEVELASNSSEVSGTNPHP
KMPQPVHSNKQNLGSVSFLGLFAAADQMDYILMLFGSFGSCIHGAALPVFFVLFGRMIDS
LGNMAMHPNEISSRISEYALYVIYLGIVLFISAWIGVASWTRTGERQTARLRLKYLQSVL
RKDISFFDTEARDANIIFHISSDTILVQDAIGDKTGHTLRYLSQFVVGFAIGFTSVWQLT
LLTLAVVPLIAIAGGAYTIIMSTLSEKGEAAYAEAGKVAEEVISQIRTVYSSVGEDKAIE
TYSESLNKALKLGKKSGVAKGVGVGFTYGLLFSAWALLLWYAGILVRHHDTNGGKAFTTI
INVIFSGFALGQATPNLAAISKGRAAAANIMNMIESDSNTSNVSAKGVVLPKVTGKIEFC
DVSFAYPSRPNMVFENLSFSISAGRTFAVVGPSGSGKSTIISMVQRFYNPSSGKILLDGN
DVSTLQLRWQREQMGLVSQEPALFATTIADNILFGKEDAGMDEIIEAAKAANAHSFIQGL
PDGYKTQAGE
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagagcttgcgtccaactcaagtgaggtttcgggcacaaacccacatccg
aaaatgccccaaccaatgcattcaaacacacagaacctgggcagtgtttcatttcttggc
ctctttgctgctgctgatcaaatggactatatcttaatgcttttcggaagtttcggatcg
tgtatccatggtgcagcatttcctgtattctttgtcttgtttggtgggatgattgattct
ttggggcatatggctatgcgttctaacgaaatgtcttcccggatttctgagtatgctttg
tacgtggtctgtcttggaattgttctttttatatcagcgtggataggtgtggcatcttgg
acgcgaactggtgagaggcagacagctcgtttgcgattgaagtatcttcaatcagttcta
agaaaggatataagttttttcgacactgaagccagagatgctaacatcattttccacatt
tcaagtgatacaatattagtccaagatgcaataggagacaagacaggccacactttgcgt
tacctttctcagtttgttgttggattcgtcattggatttacatctgtatggcagctcacg
cttcttactttagctgtggttccactgatagctattgcagggggtgcttataccataatc
atgtccaccttatcagaaaaaggtgaagctgcttacgctgaagccggaaaagttgctgaa
gaggttatttcacagattcgtactgtgtactcatttgttggagaggacaaagctattgaa
acatactctgagtcacttaacaaggcactcaaacttggtaagaaaagtggggttgcaaag
ggagtaggtgtaggctttacatatggactgttgttttctgcgtgggcaatgcttctctgg
tatgctggcataatggtaagacatcatgacacaaatggaggcaaagcatttacaatgatc
atcaatgtcatcttcagcggatttgctcttggtcaagctactccaaacctggctgccatt
tctaaaggccgagctgctgctgcaaatatcatgaacatgattgaatcagattctaattcc
tctaatgtatcagacaagggagtagtgttgccaaaagtaacagggaagattgagttttgt
gatgtttcttttgcctatccatcacgacccaacgtggtgttcgaaaacctgagcttttcg
attagtgctggcaggacttttgcagttgttggtcccagtggttcaggaaagagcaccatt
atatccatggttcaacgattctacaacccctcttcaggtaaaatactgttggacggaaat
gatgtttcaactctacaactgagatggctacgggaacagatgggattggtaagtcaagaa
ccagcattgtttgccactactatagctgacaatatcctgtttggtaaagaagacgccggc
atggatgagatcatagaagctgctaaagctgccaatgcacattcttttattcaaggttta
cctgatggctacaaaactcaggctggagagggaggaactcagctttcaggagggcagaaa
cagagaatagctattgctagagcagttctgagaaacccgaaantattgctcttagatgag
gccactagtgctctagattttgtgttgattgtcactgcactgtgcatagcagaaactctt
gctcttgctccagacattgtaaaggggtcacaggcactagggccaatttttagaatactc
aaaagagaaacagccatacactctaatgatccaacaacaaatgtggttgctgatatcaga
ggagacatagaattcagaaatgtaagctttcattaccctgcaagatctgatatcaccatt
tttgacaacttgaatctgagggtgtcagcaggtaaaagtcttgcagttgttggcccaagt
ggttcggggaagagtactgtgattgcactagtaatgagattttatgaccctatttccgga
gcagttataattgatgggcatgatatcaaaggcttaaatttgaaatctttgaggaagaaa
ataggactagtccaacaagagccagcattgttctcgacaacagtgtatgacaacatcaag
tatgggaatgaggaagcatccgaagttgaggtaacgagggcagcagaagcagcaaatgcc
catgaattcataagcagaatgcctgaagggttcaaaactcaggttggagagaaaggagtg
cagttatctgggggcgagaaacagcgagtggcaattgctagagctatactgaaagatcca
tcgattcttcttttagatgaagccacaagtgcattggacacagagtctgagaagctggtt
caggagtcccttgataagctaatggaaggccgaacaaccattttggtagcacacagattg
tcaactattcgtgatgcaaacaagattgcactgctgcaaaatggtagggtggtggaaatg
ggcagccatgagcagctgattggaacacccggtagtctgtataaacaattagtcagacta
cagcaagagaagagtgaacaaaatgtcagtcgctactatacacattgcttccttgaggaa
ctaagtacaaaggagttgctgaagaagatgagagcaacaacttcggctaattggtataca
atggaggaagtagagcttgcctccaactcaagtgaggtttcgggcacaaacccacatccg
aaaatgccccaaccagtgcattcaaacaagcagaacctgggcagtgtttcatttcttggc
ctctttgctgctgctgatcaaatggactatatcttaatgcttttcggaagtttcggatcc
tgtatccatggtgcagcattacctgtattctttgtcttgtttggtcggatgattgattct
ttggggaatatggctatgcatcctaacgaaatatcttccaggatttctgagtatgctttg
tacgtgatctatcttggaattgttctttttatatcagcatggataggtgtggcatcttgg
acgcgaactggtgagaggcagacagctcgtttgcgattgaagtatcttcaatcagttcta
agaaaggatataagttttttcgacactgaagccagagatgctaacatcattttccacatt
tcaagtgatacaatattagtccaagatgcaataggagacaagaccggccacactttgcgt
tacctttctcagtttgttgttggattcgccattggatttacatctgtatggcagctcacg
cttcttactttagctgtggttccactgatagctattgcagggggtgcttataccataatc
atgtccaccttatcagaaaaaggtgaagctgcttacgctgaagccggaaaagttgctgaa
gaggttatttcacagattcgtactgtgtactcatctgtgggagaggacaaagctattgaa
acgtactctgagtcacttaacaaggcactcaaacttggtaagaaaagtggggttgcaaag
ggagtaggtgtaggctttacatatggactgttgttttctgcgtgggcattgctcctctgg
tatgctggcatacttgtaagacatcatgacacaaatggaggcaaagcatttacaacgatc
atcaatgtcatcttcagcggatttgctcttggtcaagctactccaaacctggctgccatt
tctaaaggccgagctgctgctgcaaatatcatgaacatgattgaatcagattctaacacc
tctaatgtatcagccaagggagtagtgttgccaaaagtaacagggaagattgagttttgt
gatgtttcttttgcctatccatcacgacccaacatggtgttcgaaaacctgagcttttcg
attagtgctggcaggacttttgcagttgttggtcccagtggttcaggaaagagcaccatt
atatccatggttcaacgattctacaacccctcttcaggtaaaatactgttggacggaaat
gatgtttcaactctacaactgagatggcaacgggaacagatgggattggtaagtcaagaa
ccagcattgtttgccactactatagctgacaatatcctgtttggtaaagaagacgccggc
atggatgagatcatagaagctgctaaagctgccaatgcacattcttttattcaaggttta
cctgatggctacaaaactcaggctggagag
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