Fragaria vesca (woodland strawberry): 101310047
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Entry
101310047 CDS
T02666
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101310047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fve02000
]
101310047
04147 Exosome [BR:
fve04147
]
101310047
04090 CD molecules [BR:
fve04090
]
101310047
Enzymes [BR:
fve01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
101310047
Transporters [BR:
fve02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
101310047
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101310047
CD molecules [BR:
fve04090
]
Proteins
101310047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_25
DUF815
AAA_15
AAA_23
DUF5531
Motif
Other DBs
NCBI-GeneID:
101310047
NCBI-ProteinID:
XP_004304963
LinkDB
All DBs
Position
LG6:4577853..4582210
Genome browser
AA seq
1264 aa
AA seq
DB search
MSGAMCSMKCLEEVTGKQIGVTENNFFMRKMSRSADKRNNIDITKNKIGSLGSIFIHVDA
IDKFLMTLGFLGAVGDGLSTRMLIVFNSGLMNNMGRGGVFDEKKMIPFFYLALASMLTCF
LEGFCWTRTGERQATKMRRNYLKAVLRQEVAYLDSHQTSASEVVISMSNDIQIIQDVLSD
KVPDFVNKVSLFVTSYVIAFVLMWKLALVGLPFLLLLVLPGWICGRNLTRISGKRRQEHI
KTGTIAEQAISSIRTVYAYVGENKTITQFSAAIHGSTKLGLKQGLVKGLAIGSTYTVFAI
WAVMSYLGSRMVIYHGALGGTVFAVGVSIINGGMAMGYALSNLKYFADACSAGENIMKVI
NRVPEIDSENMEGTVLDNVSGEVQFDHLKFAYPSRPESIVLNNFSLTVPAGNTVALVGSS
GSGKSTATLLLQRFYNPLEGHILLDGFAIDKLQLKWLRSIMASVSQEPSLFSTTIKENIL
FGKEDGTMEEVVEAAIASNAHNFISQLPNGYDTQVGERGVQVSGGQKQRIAIARALIKKP
KILLLDEATSALDSESEGLVQEALHRAATGRTTLVIAHRLSTIQKADVIAVMQNGSVMEL
GSHDELIQQTNGVYASFVCLQQTPQKETPEDQGPSSSLVNLYDSTSTWHLDSTSQLVASD
STSTTTAQESRSNLSKQKSSYWRLLSMNIPEWKQAVLAWLCAIFFGAVEPLYGFTMGTTL
SIYFLTNPEEIKAKITTLAFCFFGLSVIALLINLLEHYSFAYIGEHLSNRIREMMLTKIL
SFEVGWFDDDRNSSGAICSKLTKDAEQVRSLVGDRMCLLIQTISAVTIAWTMGLIIAWRL
AVVVIATQPIIIMGLYTRRVLLSRMSSKAVKSQEESCKLAAEAIYNLRTITSFSAQSRIL
KMLEKVQEGPHRESLRQSWFAGIGLGFSMSTSILIVGLSYWYGSRLVSQDYLTPRAVFET
ILILLTTGRVIADAGSMTSDLAHGWDAIGSIFGILDRTTRIEPQVPKDSQVEKLMGEVHF
LDVYFAYPTRPNVMIFQGFSMNIEAGKSTALVGQSGSGKSTVIGLIERFYDPIRGVVEID
GRDIKSYNLRSLRKHMALVSQEPTLFAGTIRENIVFGASENMDETMVIEAARAANAHEFI
SALKDGYDTSCGDRGLQLSGGQKQRIAIARAILRNPAVLLLDEATSALDSQSEKVVQEAL
EHVMVGRTSVVVAHRLSTIQNCDHITVLDKGKVVEKGSHSSLLAKGPSGAYYSLVNFTSR
STQS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggcaatgtgttcgatgaaatgtcttgaagaagtgacaggtaagcaaatcggt
gtgacagagaacaacttcttcatgagaaaaatgagtagaagtgcagacaaacgcaataat
attgacattacgaagaacaaaattgggtcacttggctcaattttcatacatgtagatgct
atcgataagttcttgatgactctcgggttccttggagctgtaggtgatggactctctact
cggatgttgattgtttttaatagtggtttgatgaacaatatgggaagaggtggagtcttt
gatgagaaaaaaatgattcccttcttctacttggccctcgcatcaatgcttacttgtttc
ttagaggggttttgttggacaagaactggggagagacaagctacaaaaatgagaagaaac
tatttgaaagcggtgttacgccaagaggtagcttacttagattcgcatcaaacaagcgcc
tctgaggttgtaataagcatgtcaaatgacattcagatcattcaagatgttctcagtgac
aaggtgccagactttgtgaataaagtctccctttttgttacaagttacgtgatagcattt
gtgttgatgtggaaactggctttggttggactcccctttctgttgcttctggtacttcct
ggttggatttgtgggagaaacttaacaagaatatcagggaagagaagacaagaacacatt
aagaccgggacaatagcagaacaggcaatatcatctattagaacagtttatgcatatgtt
ggagagaacaaaactataacacaattttctgcagccatacatgggagtacaaagcttggt
ttgaagcaaggcttggttaaggggttggcaattggtagcacctacactgtctttgccatt
tgggctgtcatgtcttacttgggtagcagaatggttatataccatggtgctctaggaggg
actgtttttgctgttggtgtttccataatcaatggaggaatggcaatgggttatgcttta
tcaaacttgaagtactttgcagatgcatgctcagctggagagaatatcatgaaggttatc
aatcgagttcctgaaattgattcagaaaacatggaaggcacagttctggacaatgtctca
ggtgaagtccagtttgatcatctcaagtttgcgtatccatcaaggcctgagagcattgtt
ctgaacaacttttctctaaccgtaccagccggaaatactgttgccttagtcggctcaagt
ggatcagggaaatcaacagcgaccttactgttgcaaagattttataaccctcttgaggga
catattctactagatgggtttgccattgacaagttacagcttaagtggctcaggtctata
atggcatctgtaagccaagagccttcattgttctcaaccaccatcaaggagaatatacta
tttggcaaggaagatggcacaatggaggaagtagttgaggctgccatagctagcaatgct
cataatttcatatctcagttgccgaatgggtatgacacccaggttggtgagagaggcgtt
caagtatcaggtggacagaagcaaagaatagcaattgcgagagcacttataaagaaacca
aaaatccttctccttgatgaggccaccagtgcattagactcagagtcagaaggactagtt
caagaagccctccatagagcagccacaggaagaaccaccttagtcattgctcaccgctta
tccaccattcagaaggctgatgttattgctgttatgcaaaatggttctgtcatggaactc
ggttcacatgatgaactaattcaacagacaaatggagtttacgcctcgtttgtctgcctt
caacaaacaccacaaaaggagacaccagaagatcaaggtccttcatcatctttggtcaac
ttgtacgatagtactagtacttggcacctggactcaacctcccagcttgttgcatctgat
agtactagtactactactgctcaagaatctagaagcaacctttccaagcagaagtcatca
tattggagattgttatctatgaatattccagagtggaagcaagcagtattagcttggtta
tgtgcgattttttttggagctgttgaacctctatatggattcaccatggggactacatta
tccatatatttcttgacaaatccggaggagattaaggcgaaaatcacaactctcgctttc
tgctttttcgggttgtctgtgatcgcgttactgattaatctcctggaacactatagtttt
gcatacattggggagcatttgagcaatcggattagagaaatgatgctcaccaagatactt
agtttcgaagttggctggttcgacgatgatagaaattctagtggtgccatttgctctaaa
ctcaccaaagatgctgaacaggtcagatctttagttggtgacagaatgtgccttcttata
caaaccatctcagctgtgactatagcttggacaatgggcctaataattgcatggaggctt
gccgtagtcgtcattgcgacccaacccataatcattatgggcctctatactcggcgtgtc
ctgctcagcagaatgtccagtaaagcagtcaaaagccaagaggaaagttgcaagcttgca
gctgaagctatctacaacctcaggaccatcacttccttctcagctcagagcaggattctc
aaaatgctagaaaaggtccaagaaggcccacatagagaaagcctgcggcaatcatggttc
gccggtattggcctcgggttttcaatgagcacttcaatcctcattgtaggtttaagctat
tggtatggcagcaggcttgtctcccaagactacctcacaccaagagcagtgtttgagacc
atcctcattctgctaaccaccggtcgggtcatagcagatgccggaagcatgacatcggac
ctggcccatggctgggatgcaattgggtcaatatttggcatcttggaccgaaccacaaga
atagaaccccaagttccaaaagactcccaggttgaaaaactaatgggagaggtccatttt
cttgacgtgtactttgcatacccaacaaggcccaatgtgatgatcttccaaggcttctca
atgaacattgaagcaggaaagtccacggcgttggtgggccaaagcgggtcgggtaaatca
accgttatcggactaattgagagattttatgatccgatcaggggggtggtggaaatcgac
ggtcgtgatataaagtcttacaacctaaggtcattgaggaaacatatggcattggtaagc
caagaacctacattgtttgctggtaccataagagagaacatagtatttggagcgtcggaa
aacatggatgaaactatggtcattgaggcagcaagggcagccaatgctcatgagttcatc
agtgcgttaaaggacgggtacgacacgtcgtgtggcgatagaggattgcaactctctggg
ggtcagaagcagcgcattgctatagcaagagctatactgagaaaccctgcagtgttgtta
cttgacgaggcaacgagcgcgcttgatagccaatcggagaaggtggttcaagaggcattg
gagcatgtcatggtggggagaaccagtgtggtagtggcgcacaggttgagtaccatacaa
aactgtgaccacattacggtgcttgataaaggaaaggtagtggagaaggggtctcactct
tctcttttggctaagggaccttcaggagcttattactccttagtcaatttcacaagcagg
agtacacaatcttaa
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integrated database retrieval system
