Fragaria vesca (woodland strawberry): 101311423
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Entry
101311423 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101311423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101311423
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101311423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
ATG17_like
DUF6306
Motif
Other DBs
NCBI-GeneID:
101311423
NCBI-ProteinID:
XP_011469208
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Position
LG7:complement(7724163..7729374)
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AA seq
756 aa
AA seq
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MSGFNFGSSASQSTSPFGSSASSFSFATSGSLFGSSAPATASTAFGAGSSPFASAPSSSP
FGFSSNTASSPAFGTPNPSPAPNPFPSFGVGSSTASTTTATSPFGFNPSTAAAGSAPATF
GSTPSASLFGASSSAQASGSTTSLFGSSPFGSTASASTSAATSSPLFGSAPASSSPLFGT
TGSSFAPSTGSALFGSSTSSAAPPSSTTQNLFGSAAPSSAAPTTSSFPSLSFSTSSSSAA
STTPAFSSFLTSSSSAASTAAPAFSNFLSSSSSAASSTAPAPAFPSFSSSTPAFAGFPSA
SSAAPATSVFTSSSSFSSFPSSAPAKPTAASTPSTTTVPSSSGGFGLSFGTPASSASQPA
FGFTNTNAASSAAPASTSLSFSKSSSPLFSTVTTTTTASSTPAASSTTQAAFSLSAFNAT
PSAPPAPSTAAPTSTAVPASSAAPSSGTTTSSFTGFSLTPASSAATTSSSGPSMFSGASV
PASSSQAQPSTTVPAFGLTTSATATTTATTTTTGTSTPAAQTSTALAVASTSGTTSNVNG
STTVSTTTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIADWDRRILQNRDVLL
RLEIEVANVVDTQAKVERQLELIETHQDEVDKALQSIEQEAECIYQDERGLLLNDEAAST
RDAMYEQAEYIERELEQVTEQIKSIIETVNANQGGELDVNDGMAPLDVVVKILNNQLSSL
MWIDEKAEEFSSRIQKLANQGPAADRELMGPRYWMS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttcaatttcggatcctccgcttcacaatccacttcccctttcggatcctcc
gcttcttctttttcattcgccacctccggttccctattcggatcctccgcgcccgccacc
gcctccaccgccttcggagccggatcctcccctttcgcctccgcaccttcctcctcccct
ttcggcttctcttccaacaccgcctcctcccccgctttcggcaccccaaaccctagcccc
gccccgaacccgtttccctcattcggtgtcggatcctccactgcctcaacaaccaccgcc
acctcccctttcggattcaacccctccaccgccgctgcgggctctgctccggctacgttc
ggctcaaccccatccgcgtcgctgtttggcgcatcctcatcggcgcaggcttcgggttct
accacatcgctattcgggtcgtccccgttcgggtcaactgcgtccgcgtccacttccgcc
gctactagctctcctctcttcggctccgctccggcttcatcttcacctttgtttgggact
actggctcttccttcgctcccagcacaggctctgctctgttcggctcatccacatcatca
gcagcgccgccctcttccaccactcagaacttgttcggctctgctgctccgtcgtctgcc
gctccaaccacttcctcattcccgagcttgagcttttcgacctcttcttcgtccgcagcc
tccaccactcccgcattctcgagctttttgacctcttcttcctctgcagcctcaaccgct
gctcctgcattctccaactttttgagctcttcgtcttctgcggcatcatcaaccgctcct
gctccggcattcccatccttttcgagctccactcctgctttcgcaggctttccgagtgct
tcatctgcagctccggccacttctgtgttcacaagctcctccagcttctcatcattcccg
agttcagctcctgccaagccgacagcagcatccacacccagtactactacggtgccttcg
tcaagcggcggtttcggcctctcatttggaacccctgcatcctcggcctcacaacctgcg
ttcggattcaccaacaccaatgcagcgtcatcagcagcgccggcttccacctcattgtca
ttttcaaagtcttcatcgccattgttttcgactgtcaccaccacaacaacggcttcttca
actccggcggcaagtagcactacacaagctgctttctctttgtcagcattcaatgcgact
cctagtgcacctcctgctccgagcactgctgcacctacttcaactgcagtacctgctagc
tcagctgctccttcatcaggcactactacgagttcctttaccggcttttccttaacacct
gcttcttcagcggctactacttcttcttctggcccttcaatgttttccggtgcctctgtg
cctgcatcctcatcgcaagcacaaccaagcactactgtgcctgcatttggtctcactact
tcagcaactgcaacaaccactgcaactacaacgacaactggtaccagtacccctgcagct
cagacatcaacagcacttgctgtggcttctactagtgggacaacctcaaatgttaatggc
agcactacagtatctacgacaacaccaaagttaccttctgagatcactgggaagactgtt
gaggagatcatcaaggagtggaatgctgagcttcaagagcgtactggaaagttccgaaag
caggctaatgcaatagcagactgggacaggaggattttgcagaatcgtgatgttcttctt
aggcttgagatcgaagtggcgaatgtggtggatacccaagctaaggtggagcggcaatta
gagttaatcgagactcatcaggatgaggtcgataaggctttacagagcatagaacaagaa
gctgagtgcatataccaggatgagcgtggattgcttcttaatgatgaagctgcatccacc
agagatgcaatgtatgagcaggctgagtatatagaaagggagctagagcaggtgacagaa
caaattaaatcaatcattgagactgtaaatgccaaccagggaggagaattggacgtgaat
gatgggatggctccactagatgtggttgtaaaaatcttaaacaaccagctaagctcttta
atgtggattgatgaaaaggccgaagagttctcttcacgaattcagaagcttgccaatcaa
ggtcctgctgcagatcgtgaattgatgggtccaagatactggatgtcatga
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