Fragaria vesca (woodland strawberry): 101311491
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Entry
101311491 CDS
T02666
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
fve04141
Protein processing in endoplasmic reticulum
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101311491
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101311491
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101311491
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101311491
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101311491
03009 Ribosome biogenesis [BR:
fve03009
]
101311491
03110 Chaperones and folding catalysts [BR:
fve03110
]
101311491
04131 Membrane trafficking [BR:
fve04131
]
101311491
03051 Proteasome [BR:
fve03051
]
101311491
03029 Mitochondrial biogenesis [BR:
fve03029
]
101311491
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101311491
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
101311491
Spliceosome [BR:
fve03041
]
Complex B
Other components
Prp19 complex
101311491
Complex C
Prp19-CDC5 complex
101311491
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101311491
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP70 / DNAK
101311491
Membrane trafficking [BR:
fve04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
101311491
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
101311491
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
101311491
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
101311491
Exosome [BR:
fve04147
]
Exosomal proteins
Proteins found in most exosomes
101311491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
101311491
NCBI-ProteinID:
XP_004302715
LinkDB
All DBs
Position
LG6:complement(9315286..9318246)
Genome browser
AA seq
647 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFTDASVQGDMKLWPFKVTSGPAEKPMIGVQYKGEEKQFAA
EEISSMVLIKMREIAEAYLGATIKNAVVTVPAYFNDSQRQATKDAGVIAGINVLRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIKDEKIGEKLPGADKKKIEDAIEAAIQWLDSNQLAEADEFED
KMKELESICNPIIAKMYQGSGPDGAGPVDDDVPAGSGGAGPKIEEVD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaggagagggaccggccatcggaatcgatctcggcaccacctactcttgc
gtcggcgtatggcaacacgaccgtgttgagatcatcgccaatgaccaggggaacaggacc
acgccgtcgtatgtggctttcaccgacaccgagaggttgatcggagatgccgctaagaac
caggtggccatgaacccaatcaacactgtttttgatgccaagcgtttgattggtcgcaga
ttcactgatgcctcagttcagggtgacatgaagttgtggccattcaaggtcacctctggc
ccagctgagaagcccatgattggagttcaatacaagggagaggagaagcagtttgctgct
gaggagatatcctccatggtcctcatcaagatgcgtgagattgccgaggcgtaccttggt
gccaccatcaagaacgcagtggtcacagtgcctgcttacttcaacgattctcagcgtcag
gccaccaaggatgctggagtcattgctggtatcaatgtcttgcgtattatcaatgaacct
acagcagctgccattgcctatggtcttgacaagaaggccaccagtgttggtgagaagaat
gtgttgatctttgaccttggaggtggtacctttgatgtctctcttcttaccattgaagag
ggtatctttgaggttaaggccacagctggtgacacccatcttggtggtgaggactttgac
aacagaatggtgaaccactttgttcaggaattcaagagaaagaacaagaaggatatcagc
ggcaaccccagggctcttaggagattgaggacatcatgtgaaagggcgaagaggaccctc
tcatccactgcccagaccaccattgaaatcgactccttgtatgagggtattgacttctac
tcaaccatcacccgtgccagatttgaggagctcaacatggacttgttcagaaagtgtatg
gagccagtagagaagtgtttgagggatgccaagatggacaagagcacagtccatgatgtt
gtgcttgttggtggatccacccgtattcccaaggttcaacaactcctccaggatttcttc
aatggcaaggagctctgcaagagcatcaaccccgatgaggccgttgcctatggtgctgca
gttcaggctgcaattctcagtggtgagggcaatgagaaggtccaggaccttcttctgttg
gatgttacccctctatctcttggtttggaaactgccggaggtgtcatgaccgtcttgatc
cccagaaatacaaccatcccaacaaagaaggaacaagtcttctctacgtactctgacaac
cagcctggtgtgctcatccaggtctatgaaggagaaagaaccagaaccagggacaacaac
ttgctcggaaagtttgagctctctggaattcccccagctcccagaggtgtgccccagatc
acagtgtgttttgacattgacgccaatggtatcttgaatgtgtcagcagaggacaagacc
accggtcaaaagaacaagatcaccatcaccaatgacaagggcaggctctcaaaggaggag
attgaaaagatggttcaagaggcagagaagtacaagtctgaggatgaagagcacaagaag
aaggttgaggccaagaacgctttggagaactacgcctacaacatgaggaacaccatcaag
gatgagaagatcggcgagaagctcccaggggccgacaagaagaagattgaggatgccatt
gaggctgccatccagtggctagacagcaaccaactcgccgaggctgatgagtttgaagac
aagatgaaggagttggagagcatctgcaacccaatcatcgccaagatgtaccagggttct
gggcctgatggtgccggcccagttgatgatgatgttccagctggaagtggcggtgcaggg
cccaagattgaggaggtcgactaa
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