Fragaria vesca (woodland strawberry): 101312527
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Entry
101312527 CDS
T02666
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101312527
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101312527
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Pectate_lyase_4
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101312527
NCBI-ProteinID:
XP_004295855
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Position
LG3:15627546..15629381
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AA seq
409 aa
AA seq
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MSLFIKSSSMVIECVSLLLLVLLINNVQAARILQAPMKTFDVNQYGGVADGKTDNSKAFI
AAWNEACKNNGGGVVLFQKGTYLVNPLMIEGSACKGPMEVQIQGTLLASKEYQYSVGIDH
WILFRYVANLVISGGGTLDGQGASAWPYNDCIKNKQCKALPGSLKFDFANNTKIENITSL
NSKNTHINCFACRDVIFSNIHITAPGDSPNTDGIKIGESSNIQIHDSVIATGDDCLAFLP
DSRNISVTRIHCGPGHGISLGSISSKSITGLSVTNSSLVGTQNGVRIKTKSPSQPGSVSN
VTFQHIQMDKVDNPIVIDQQYCPGSGCTAPKTSEIQITDVKYIDIWGTSNTETAVNFKCS
ENKPCTKIELRDINLNYSGGRQANESCLNAKGVASGKEYPKSYRPSTYR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtttataaagagctcgagcatggttatcgaatgtgtgagtttattgttgttg
gtattactcatcaacaatgttcaagctgctcggatccttcaagctccgatgaaaactttc
gatgtaaaccaatatggtggtgttgcagatggaaaaactgataacagcaaggcttttatt
gctgcatggaatgaagcttgcaaaaacaatggaggtggcgtggtcttatttcagaaaggg
acatatttagtgaaccctttgatgatagaaggctctgcttgcaaggggccaatggaggtg
cagatccagggcaccttattggcttcaaaagagtaccagtactcggtcggtatcgaccat
tggatcctcttccgatacgtcgcaaacttggtgataagtggtggagggacgttggatggc
caaggagcctctgcttggccctataacgactgcatcaaaaacaagcaatgcaaggcactg
cctgggtcattgaagttcgactttgccaataatacaaagatcgagaacataacaagcctc
aacagcaagaacacccacatcaactgtttcgcatgtcgtgatgtgatattcagcaacatt
cacataactgccccgggcgacagccccaacaccgatggaatcaagatcggtgaatcaagc
aacatccaaatacatgattcagtaatagccacaggagatgactgcctagctttccttcct
gattcaagaaacatttccgtcactcgtattcattgcggacctggccatggaatcagtctt
ggaagcatttccagtaaatctattactggcttgagcgtaacgaattcgagcttggtaggt
actcagaatggtgttagaatcaagacgaagagtccctctcaaccaggcagtgtttcaaat
gttacatttcaacacattcaaatggataaggtcgataaccccatagtcattgatcaacaa
tattgccctggtagtggttgtactgccccgaaaacttcggagattcagatcactgatgtg
aagtacattgacatttggggtacttcaaacacagaaactgcagttaatttcaagtgtagc
gaaaataaaccttgtacgaagatcgagttgagggatatcaacctaaattacagcggaggt
cgacaggcaaacgaatcgtgtttgaatgcaaaaggagtagcttccggcaaagaataccct
aaatcttacagacctagtacgtacagatga
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