Fragaria vesca (woodland strawberry): 101313540
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Entry
101313540 CDS
T02666
Name
(RefSeq) uncharacterized LOC101313540
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101313540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101313540
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
101313540
DNA repair and recombination proteins [BR:
fve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101313540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
101313540
NCBI-ProteinID:
XP_004287130
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Position
LG1:complement(874793..878229)
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AA seq
429 aa
AA seq
DB search
MSGAPRVKSINVANSESRSVLGPAGNKGGAFSARKPATKPLRKTEKMVEEFTSAEDKKTQ
QSSKLSTSPQLHSLSVPSVLRRHEQLLQSNFSLNASCSSDASTDSFHSRASTGRLIRSNS
VGSRRKQYVSKPRSVVSDGGLDSPPGGSQSKKRCAWVTPNTDPCYVAFHDEEWGLPVHDD
KKLFELLVLSGALAELSWPLILSKRHIFREVFADFDPVDVSEFNEKKIMAPGSVASSLLS
ESKLRAILENARQMTKVIDEFGSFDKYIWSFVNNKPIVSRFRYPRQVPAKTPKADVISKD
LVRRGFRSVGPTVIYSFMQVAGITNDHLVSCFRFQDCLNAAEGKEENRTKEESGKKTENG
IESDLSVALDELSFSSYEDCPDKKKTYEDCLDHPGSIISLPTTLTDSELLILFLYRVVLK
IVSCVINEF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagctccaagagtaaagtctatcaatgtggctaattcagagtcacggtcggtg
cttggacctgctggaaataagggaggggcattcagtgcacgaaaaccggctactaagcca
ctgagaaagactgagaaaatggttgaggagtttacatcagctgaagacaagaaaacccag
caatcttcaaagctttctacctctcctcagctgcattctctcagtgttccctcagtactt
cgtcggcatgagcagttattgcagtctaatttttcactaaatgcttcatgttcatctgac
gcctctacagattcattccatagtagagcatcgactggtagacttattcgatcaaatagt
gtagggagtaggaggaagcagtatgtttctaaaccaagaagtgttgtttctgatggtgga
ttggattctcctcctggtggttctcagtcaaagaaacggtgtgcttgggtgacgccaaat
actgatccatgttatgttgcttttcatgatgaagaatgggggcttccggtacacgatgac
aagaaactgttcgagcttcttgtcctatccggtgctttggctgaactttcatggcctctc
attctaagcaaaaggcacatctttagggaagtgtttgcagattttgatcctgttgatgtc
tcagagtttaatgagaagaagataatggcaccgggaagtgttgcaagctccctattgtct
gaatcaaagttgcgtgctatcctcgaaaatgcacgtcaaatgaccaaggttatagatgag
tttggatccttcgacaagtatatttggagctttgtgaataacaagcctatagttagcaga
ttccggtaccctcggcaggttccagccaaaaccccaaaagcagatgtgatcagcaaagat
cttgtgagaaggggattccgtagtgtgggtcccactgtcatctactctttcatgcaagtc
gccggaattacaaatgaccatctggttagttgcttcagattccaggattgtcttaacgct
gcagaagggaaggaagagaatcgcaccaaggaagagagtggaaagaaaaccgagaacggg
atagaatcagacttgtcagttgccctagatgagttgagtttctcctcttatgaagactgt
ccagataaaaaaaagacttatgaagactgtcttgatcaccctggttcaatcatcagttta
cctaccacattgactgattcagagctactcatactcttcttgtatagggtagtgttgaag
atagtttcgtgtgtaattaatgaattctga
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