Frieseomelitta varia: 122533436
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Entry
122533436 CDS
T09482
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
fvi
Frieseomelitta varia
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fvi03037
]
122533436
Cilium and associated proteins [BR:
fvi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122533436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ERM_helical
ATG16
Laminin_II
DUF641
Motif
Other DBs
NCBI-GeneID:
122533436
NCBI-ProteinID:
XP_043519038
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MSRPLSKGISQLTTRGQMERRRPPFLRGSSKTKEVEKGAGSKMDSAGNISGGDRLSEEDL
SPDALVRQNYELRHRLEEEAANYKRRLDTYRQAQQHQAALVSRLQAKVLQYKQKCSELES
QMAESAIHDSNKAASSASPTTSVLDAAYQTLREIREEQIHDLDTALKKLAEERKRCEKLL
QLNTTLKDQLEESHQTNEALTNDLQKLSNDWDILREELAIKEEEWREEEQAFNEYYTSEH
NRLLNLWRDVVSVKRLFADIKSSTERDLLKMKNSIISTFNDVSSACNNTGFAMRMQAAMQ
PMVSQQVQQAQEQVTTDLKTELTTLKQQYDAAQSENQMKEKKISQLIRDIHNLEERCGEA
ESEVHRNSRLQDDIEILQSALRDIAHAVIQDAETREIESSQAPPHLHLSPTGPIPQKSPK
RSTRSNTVPAFAESTISAVQAALHKYQLTIHELQVKLQTNKEQLQTTRKQCESAEENVKN
LEKRAEELITELDAVRSHCSQLTQEKDMLQKGLDTVRIEKNALDKSRVEINSMMESLNSD
CEKLQKANNKLQKLCDNLEDEKLYLQSELNRLSKDIELRELNLRSEEDKCSKMREELLTL
REELNKAYLTKDMLEQQKLETDGLIAHIEKNKGDLELELERVLLEKSDVQEVLIKLETVC
SNHEQEKQRLQEELKKITEEKNKLANQCTDQQGDLGSLRKELLQAEQTRLDLESEKATLN
EKVKFLEIEKEKIEIEAAHVTRERGDLSNQLSVLARKKETLNEELMRVRQRLEQANEMNG
RINRNLEDLVKDNEEKQVLLETNEKEVQRLQEQLASMRSEKETLEGVLFDTQTNLENMHV
KKTQLEKEQKELLIKQESLKGQVERLMKELESSEKRTHDIKQTLTQQSGDQEAEFQQIIS
NVKKHSEENIKKLTDEKEQIKINLEKRLQQSLLQLTGEKDNEINQLQQRIDEMQQHIENL
CQQHEEVLLRAENDKQQALLIAHHDQQALMEKLETVLREMEEEKNNVERVKREAAARTEQ
ERNNTNQLRDELSRLKTKLDETKLKADEEKIKLDLKIEELWKERESAQRESEELQVQLHM
TEDKVDSLQNQLHETIRKLKDAENLNETLRKELMDIRRQLADCTYEKEKYNSSNKELREH
VKRIESEKREQSRILEESYQKISALEDMKLNIDAERSRLQAQIRDMEKEILQLQKQLHFT
QDELQKSHQNNAQAQNDEKELQARLTNETEERERLQLQLHQVKKQLMDVDNSLKVTRQEL
GRLRSRADEENERWRVREQELVVRLEDSRCRERKLEDQKHNLEVCLADASQQIQELKARL
GGSEGRVRALDAQLSQLEVTKKEVEQKLSSVASTLRRIAGIQMDGSVNIPFKLMSPSRRW
SPARTQDHIDSTRDVILDVDPEVVRKGVRSLMQQVAQIERERDDCKTELCNLKKQLSETQ
EIQNRSDMQINTLLTNLRILQDEKNSLEVKLSQKQSGYEMQLNALQLKTEECEQLREKVI
NLEMMISNSSEEKAQSEEKVDKLKQALNKVENEKRNLQEELSRSESRATKLELQRMSLEG
DLQRLQMMLQEKDANIHKLQERNDMQNRTVTNLEERCASMKSTIEQLNLALEKASNTESE
LKNEINSLHHNIMELTTSVQTFNEKNKQLQKQLSNAENERRILSERIESLQQALSDIKHT
NQTLTDQITHLQNELANNEVQRCALESQLRMVVYPQEESVNKGDELLRQLQIVQRERSEM
RGKMEALNDKIKLLEADKRNLERQLSLLKSTNRSKSYERYEKAHAELLGTSFDIEHYEQE
NRELRLRVRRLETQLAEKEAELIRMKSSYSHSIFDFSRDRTGEVERLRAAQLQAEKLLEA
REQSHRQQVLRLENQIQLLREQLNQEIKRRQLYVLRSSRAGREMQQLRQALGDSLRTVAQ
DPSLDAVLLEHEARKLDSTLTSTTSLPPSLALPPPPSYDRSSTPAQLK
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggccattgtctaaaggaatttcacaattaacaacaagaggacagatggaaagg
cggcgaccgccgtttctcagaggctctagtaagacgaaagaggtagaaaaaggtgcaggt
agtaaaatggattctgcaggcaacataagtggtggagatcgtttaagtgaagaagatctt
tcaccagatgcattagttaggcagaactatgaattaagacatcgtcttgaagaagaggca
gctaattataaaagacggctggatacatatagacaagcacaacaacatcaagctgctctt
gtttcccgtttacaagccaaagtactgcaatacaaacaaaaatgttctgaattggaaagt
caaatggctgaatctgctatacatgattctaataaagctgcaagttctgcatctccaaca
acttctgttttagatgcagcttatcagactctaagagaaatacgtgaagaacagattcat
gatctagatactgccttaaaaaaactggcagaggaacgtaaaagatgtgaaaagctattg
caattgaatacaactctgaaagatcagttggaagaatctcatcaaacaaatgaagcactc
acaaatgatctacaaaaattaagcaatgattgggatattttaagagaagaattggctatc
aaagaagaagaatggagagaagaagagcaagcttttaatgaatattatacttcagaacat
aatagattattaaacctttggcgcgatgttgtttctgtaaagcgactatttgcagatata
aaatctagtacagaaagagatctactaaaaatgaaaaatagcattatttctacatttaat
gatgtttcgtcagcttgcaataatacaggatttgctatgagaatgcaagcagctatgcaa
ccaatggtatctcagcaagttcaacaggcacaggaacaagtaacaactgatttgaaaaca
gaattaacaacactcaaacaacagtatgatgcagctcaaagtgaaaatcaaatgaaagag
aaaaaaattagtcaacttattcgtgatattcataatttggaagaaagatgcggagaagca
gaatcagaagtacatcgcaattcacgtttacaagatgatatagaaattttacaatctgca
ttgagggacatagcacatgctgtaattcaagatgcggaaactcgcgaaatcgaatctagt
caagcacctccacatcttcatttatcacccactggtccaatccctcaaaaatcaccaaaa
agaagtacaagaagcaacactgtaccagcctttgctgaaagtactatcagtgctgtacaa
gcagctctacataaatatcaattgactatacatgagctccaggtaaaattgcaaactaat
aaagaacaattacaaacaactcgaaaacaatgtgaaagtgcggaggaaaatgttaaaaat
ctagaaaaaagagcggaggaactaattactgaattggatgcagttcggtcacattgctca
caacttactcaagaaaaagacatgttacaaaaagggcttgatactgtaagaatagaaaaa
aatgcacttgacaaaagcagagtagaaatcaatagcatgatggaaagcttgaatagtgat
tgcgaaaaattgcagaaagctaacaataagttgcaaaaactttgtgataatttggaagat
gaaaaattgtatcttcaaagtgagctcaatagattatccaaagatatagaattaagagaa
ttgaatctacgatcggaagaagacaaatgcagtaaaatgagagaggagctactaacttta
cgagaagaattaaataaagcatatctcacaaaagatatgttagaacaacaaaaattagaa
acagatggattaattgcacacattgaaaaaaataaaggtgatttggaactagaattggaa
cgtgtattattagaaaaatcagatgtacaagaagttttaataaaattagaaacagtctgc
agcaatcatgaacaagagaaacaaagattacaagaagaattaaaaaagataacagaagaa
aaaaataagttagcaaatcaatgcactgatcagcaaggtgatctaggttccttaagaaaa
gaattacttcaagcagaacaaactagactcgatttggaatcggaaaaagcgactttgaat
gaaaaagtaaaatttttggagatcgagaaggaaaagattgaaatagaagcagcacatgtt
acccgtgagcgtggagatttaagcaatcaattgtcagttctagcgcgaaaaaaagaaaca
ttaaatgaagaattaatgagagtcaggcaaagattggaacaagcaaacgaaatgaatgga
agaataaatcgaaatttagaagatcttgtaaaagacaatgaggagaagcaggtactttta
gaaactaatgaaaaagaagtacagcgattacaagagcaacttgcatcaatgcgcagtgaa
aaggaaacgttagaaggtgtcttatttgatacacagactaatttagaaaatatgcatgta
aaaaagacacaattagaaaaggaacagaaagaattattgataaaacaagaaagcttaaaa
ggacaagtggaaagattaatgaaggaattggagagtagtgagaaacgaactcatgatata
aaacaaactctaacacaacaaagtggcgaccaagaagctgaatttcagcaaattatttct
aacgtgaaaaagcatagtgaagaaaacattaaaaaattgactgatgaaaaagaacagata
aaaataaacttagaaaaacgacttcaacaatccctattgcaacttaccggagaaaaagat
aatgagataaaccaattgcagcaaagaatcgatgaaatgcaacagcacatagaaaatttg
tgtcaacaacacgaggaagttcttcttcgagcagaaaatgataaacagcaagctcttctt
atagctcatcatgatcagcaagcattaatggagaaattggagactgttttacgtgaaatg
gaagaagaaaagaataatgtagaacgagtgaaacgggaagctgcagcgcgtaccgaacag
gagcgtaataatacaaatcaattgcgcgatgaattaagtcgtcttaaaacaaaattagac
gagaccaaattaaaagctgacgaagaaaagataaagcttgacctaaaaattgaagaactt
tggaaagaacgtgaatcagcacaaagagaatccgaagaactgcaagttcaattacacatg
acggaagataaagttgatagtttgcaaaatcaattgcatgaaactattagaaagcttaaa
gatgctgaaaatcttaacgaaacattgcgcaaagaattaatggatattaggaggcaatta
gccgactgtacatacgagaaagaaaaatataacagtagcaataaagaattacgcgaacat
gtgaaacgtatcgaaagcgaaaaaagagaacaaagtagaatactagaagaatcgtaccag
aaaatttcagcattggaggatatgaaattaaatatagatgcagagagatctcgccttcaa
gcacaaattcgtgatatggagaaagagatattacaattacagaaacagcttcatttcacc
caagatgaattgcagaaatctcatcagaataacgcgcaagcacaaaatgatgaaaaggaa
ttgcaagcccgactaactaatgaaacagaagaaagagaacgtttgcaactgcaattacat
caagttaaaaaacagctaatggatgttgataacagcctgaaagtaactaggcaagagctc
ggaagattgcgttctcgcgcagatgaagaaaatgaacgatggagagttagagaacaagaa
cttgtagttcgcctcgaggatagtcgatgtcgtgaaagaaaactcgaggaccaaaaacat
aacttggaagtttgtttggctgatgcatcccaacagattcaagaactcaaagctcgcctt
ggtggctctgaaggacgagttcgagcactagatgctcaattatcacaactggaagtgaca
aaaaaagaagtcgaacaaaagttaagcagtgtggcgtctacattacgtcggattgcaggt
attcaaatggatggaagtgttaacatacccttcaaattaatgagtccgtcaagaaggtgg
agtccagcaagaactcaagatcacattgattctactagagatgtgatacttgatgttgat
cctgaagttgttagaaaaggtgtacgatctctcatgcaacaagtagctcaaattgaacgt
gaaagggatgattgtaaaactgaattgtgtaacttgaaaaagcaattgtcagaaactcaa
gaaattcaaaatagatcagacatgcagataaacactttattaacaaatttaagaattctt
caagatgaaaaaaattcattagaagtgaaattatctcaaaaacaaagcggctatgaaatg
cagttaaacgctttacaactaaaaacagaagaatgcgagcaattgcgtgaaaaagtaatc
aatctcgaaatgatgatcagtaacagttccgaagaaaaagcacaatctgaggaaaaagta
gacaaattgaaacaagctctgaacaaagtcgaaaatgaaaaacgtaatttacaagaggaa
cttagtaggagcgaatcccgcgctacaaaattagaattacaaagaatgtcgttagaaggt
gatcttcaaagattgcaaatgatgttacaggaaaaagatgcaaacattcataaattacaa
gaacgaaatgacatgcaaaaccgaacagtaactaatttagaagaacgttgtgcttcaatg
aaatctacaatagaacaattaaatcttgcattagaaaaagcatctaatacagaaagtgaa
ttaaagaatgaaattaattcattgcatcacaatattatggaattaacgacttctgtgcag
acttttaacgaaaagaacaaacagttacaaaaacaactttcaaatgcggaaaatgaacgc
agaattttatctgaacgcatagaatctttgcaacaagctttgagtgatataaaacacacg
aatcaaacattaacggatcaaattactcatttacaaaatgagttagcaaataacgaagta
caacgttgtgccttagaatcccaattgagaatggttgtttacccgcaagaagaaagtgta
aacaaaggcgatgaattattacgacaattgcaaatagtacaaagagagagaagtgaaatg
agagggaaaatggaagctcttaacgacaagataaaattgttagaagctgataaacgcaat
ttggaacgacagttatcgttacttaaatcgactaaccgtagtaaaagttatgaacgctat
gagaaagcacatgcagaattgcttggcacgagtttcgatatagagcattatgaacaggaa
aacagagagttaagattgagagtccgtagattagaaacacaacttgcagagaaggaagct
gagctcataagaatgaaatcgagttatagtcattcaatatttgattttagccgagataga
actggagaagttgaaagacttagagcagctcaattacaagctgagaaattgttagaggcg
agagaacaaagtcatcgccaacaagttttacgtctggaaaatcagatacaactactgcgc
gaacaacttaatcaagaaataaaacgtcgacaattgtacgtcttgcgaagttcaagagct
ggtcgagaaatgcaacaattaagacaggccttaggggactctttgagaactgtagctcaa
gatccgtcattagatgcagtgttattagaacatgaggctcggaaattggattctactttg
acaagtactaccagtttaccgccatcattagctttacctccaccaccgtcttacgataga
tcttccacgccagcacagctcaaataa
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integrated database retrieval system