Frieseomelitta varia: 122534654
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Entry
122534654 CDS
T09482
Name
(RefSeq) THO complex subunit 1-like isoform X1
KO
K12878
THO complex subunit 1
Organism
fvi
Frieseomelitta varia
Pathway
fvi03013
Nucleocytoplasmic transport
fvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122534654
09122 Translation
03013 Nucleocytoplasmic transport
122534654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvi03019
]
122534654
03041 Spliceosome [BR:
fvi03041
]
122534654
Messenger RNA biogenesis [BR:
fvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122534654
Spliceosome [BR:
fvi03041
]
Complex C
Other components
EJC/TREX
122534654
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122534654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
122534654
NCBI-ProteinID:
XP_043521440
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MAMFEVLRKEYSDYLQQCFKVSDVQTFQKKCAERCTSDSDRKAAIDQALRDTLLVILSEN
ALSNVNLFETYITFCIELCRKDLATANMPVMLLGDIFDSMTLDRCEQLFTFIENNVVVWK
EDLFFSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKCFPFSEISGLNIVSEFNLE
NHIEFGSEKSEGEDLEQIIKDDDKSEAKVPIDYNLYRKFWALQDFFRNPNQLYLKVHWKV
FSTYASSVLSVFSSFKLEEQHNYSSTSVKIDSSIKGSRKETPYFAKYLTNQKLLELQLSD
SNFRKYVLLQFLILFQYLNSTVKFKAFLASGYETSETYELKPDQVDWVKATMEQVYALLT
ETPPNGSIFTETVRNILKREEHWNAWKNEGCPPFKRPTPDSSVDIEELRKPKKPRRRIGD
VIKDAQTVGKYHMGNPELAKLWNLCPNNLEACKSKNRDFLPSLETYFEEAIMQLDPNAMV
EDEYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSNI
KLETEKIPPPEVNDQEFNKDVLKQESEQVEVENTDTKGRKLTKVTPEMVAKLSEILKNNW
KKLATKFGYTSEEITFFQGKPTPYEQCKNMLEIWAEEDVDASMENLVYILKGLKLTKALA
VLKSYFN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtttgaagtattacgaaaagagtacagtgattatttgcaacagtgttttaaa
gtgtcagatgtacaaacctttcaaaagaaatgtgctgaacgatgtacaagtgatagtgat
agaaaagctgcaattgatcaggcactgagagatactcttcttgtaattttatctgaaaat
gcattgagtaatgtgaatctatttgagacttacattacattctgcattgaattatgcaga
aaagatttagcaactgcaaatatgcctgtaatgttacttggtgatatatttgattctatg
acacttgatagatgtgaacaattgtttactttcattgaaaacaatgttgtggtgtggaag
gaagatttattctttagtgcttgtaagaataatttattaaggatgtgcaatgacttactt
agaagattgtctaggtcacaacaaactgtattttgtggaagaattctattatttttggcc
aagtgttttcctttctctgagatatctggtcttaatattgttagtgaattcaatttggaa
aatcatatagaatttggctctgaaaaatcagaaggagaggatttggagcaaataattaag
gatgatgataaatcagaagctaaagtgccaatcgattataatttgtacagaaaattttgg
gcgcttcaagatttctttagaaatcccaatcagttatacctgaaagtgcactggaaggta
ttttcaacatatgcttcaagtgtgttgtcagtattttcatcttttaaattggaagaacaa
cataattattcctcaacgagtgttaaaattgattcttccataaaaggatctcgtaaagaa
actccctactttgcaaaatatttgacgaatcaaaaattattggagttacaattatctgac
tcaaatttcagaaaatacgtattgctgcagttcctcattcttttccagtatcttaatagc
actgttaaatttaaagccttccttgccagtggctatgagacaagtgaaacatatgaactg
aaacctgatcaagtagactgggtaaaagcaaccatggaacaagtatatgccttactgaca
gaaacacctcctaatggttcaatatttactgaaactgttagaaatatattgaaacgcgaa
gagcactggaatgcttggaaaaatgaaggttgtccaccattcaaaagaccaactccagat
tctagtgttgacatagaagaattaaggaaaccaaagaaaccaaggcgtagaattggagat
gttattaaagatgctcaaacagtaggaaaatatcatatgggaaatccggaactcgcgaag
ttgtggaacttgtgtcctaataaccttgaagcatgtaaatccaagaacagagatttcctt
ccgtctttagaaacatactttgaagaagctatcatgcaactagatccgaatgcaatggta
gaagatgaatataaaaaagtaaatgatggaaatttcggctggcgagcattaagattatta
gctagacgtagtccccatttttttgttcacggaaattatcctattaataaacttcctgaa
tatctcgaaactatgattaaaaaaattgccaaggatcgtccacagacacagtcgaatata
aaattagaaacggaaaagattccaccaccagaagtgaacgatcaagaatttaacaaagat
gttctaaaacaagaaagtgaacaagttgaagtcgaaaatacggatacaaaaggacgaaaa
ttaacgaaagtgacacctgaaatggtggcgaaattatcggaaattctgaaaaacaattgg
aagaaattagcaaccaagttcggttacacgagtgaagagattacgtttttccaaggaaaa
ccaacaccatacgaacaatgtaaaaatatgctagaaatttgggcggaagaagatgtagac
gcatccatggaaaatttagtgtatatcttaaaaggtttaaaattgacaaaagcgttagct
gttttaaaatcttattttaattga
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integrated database retrieval system
