Frieseomelitta varia: 122536116
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Entry
122536116 CDS
T09482
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
fvi
Frieseomelitta varia
Pathway
fvi03082
ATP-dependent chromatin remodeling
fvi03083
Polycomb repressive complex
fvi04213
Longevity regulating pathway - multiple species
fvi04330
Notch signaling pathway
fvi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
fvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122536116
03083 Polycomb repressive complex
122536116
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122536116
04350 TGF-beta signaling pathway
122536116
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
122536116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fvi03036
]
122536116
Enzymes [BR:
fvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122536116
Chromosome and associated proteins [BR:
fvi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
122536116
HDAC complexes
Sin3A-HDAC complex
122536116
BRAF-HDAC complex
122536116
REST complex
122536116
SHIP complex
122536116
MiDAC complex
122536116
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122536116
Heterochromatin formation proteins
Other heterochromatin formation proteins
122536116
Chromatin remodeling factors
NuRD complex
122536116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
122536116
NCBI-ProteinID:
XP_043524139
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSTLPHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDESYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQPIPEDGAVIEDSEAEEKINPDERLPQRDLDKRIQHENE
YSDSEDEGEGGRRDNRSFKGSRKRPRLEKGQEGIESDLKKEEDIKSEPKENEKDEKTNVT
NEETKKDGGANP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgttaccacatagcaagaagcgtgtctgctactattatgatagtgatattgga
aattattattatggacaaggacatcctatgaagccacatcgtataagaatgacacataat
ttacttttgaattatggtctttataggaagatggaaatatatcgtccacacaaagctaca
gcagatgaaatgacaaaattccacagtgatgattatattaggtttttgagatccataaga
cctgataatatgtcagaatataataaacaaatgcaacgatttaatgtaggagaagattgc
cctgtttttgatggtttatatgaattttgtcaattgtcagctggagggtctgtagctgct
gctgtgaaacttaacaaacaagcttcagaaatttgcataaattggggtggtggtttacat
catgctaaaaaaagtgaagcttctggtttttgttatgtaaacgatattgtactaggaata
ttggaattgctcaaatatcatcaaagagttttatatattgatattgatgttcatcatgga
gatggtgtagaagaagctttttataccacagatagagtgatgacagtttcattccataaa
tatggtgaatattttcctggtactggcgatctacgcgatattggtgcaggaaagggaaaa
tactatgcagtcaacataccattaagagacggtatggatgatgaaagctatgaatcaata
ttcgtacctattatttcaaaagtaatggaaactttccagccttctgctgtagttctacaa
tgtggtgctgattcactgacaggggatcggttaggttgtttcaatttaacagtgagaggt
catggaaaatgtgtcgaatttgtaaaaaaatataatctacctttcttaatggttggtggt
ggtggatatacaattaggaatgtgtccagatgttggacgtacgaaacttcagtagctctt
ggttctgaaattgcaaatgaattaccttataatgattactttgaatattttggtcctgat
tttaaattgcacattagtccttcgaacatggcaaatcaaaatactccagaatatcttgag
aaaattaagactagattatttgaaaatttaagaatgttgcctcatgcaccgggtgtacaa
gtccaaccaattccagaagatggtgcagtcattgaagattcagaagctgaggaaaagata
aacccagacgaaaggttaccacaacgagatttagacaaaaggatacaacacgaaaatgaa
tatagcgatagtgaagatgaaggagaaggggggcgaagagataatagatcatttaagggt
tccagaaaacgacctcgtttagaaaaaggacaagaaggtatagaaagcgatctaaaaaaa
gaagaggacataaaatcagaacccaaagaaaacgaaaaagacgaaaaaacaaatgttaca
aatgaagaaacgaagaaagatggtggtgcgaatccctga
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