KEGG   Frieseomelitta varia: 122537552
Entry
122537552         CDS       T09482                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
fvi  Frieseomelitta varia
Pathway
fvi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:fvi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    122537552
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fvi03400]
    122537552
Enzymes [BR:fvi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122537552
DNA repair and recombination proteins [BR:fvi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     122537552
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT RNA_ligase BRCT_2 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 122537552
NCBI-ProteinID: XP_043526731
LinkDB
Position
Unknown
AA seq 902 aa
MSRTLASEIEFKNLCDVLEKISEAHLSRKADILKRFIQKCRLMSHKLKTEFATMNVSLYP
ILRLILPDLERERDAYNLKEKSLADLYIRVFCLGKDSKDANKLKQYKIPTAKNIAGRDFA
EKAYWILQNRFPRESSNFTIERINLFLDDLSSKNKTSLSKNETFKVLFGKINALEFKWIT
RIILKNLKLGIGTKKILQVFHRDANSLFNVSSNLQHVCDTLYDPQMRYHHDIQVFSHFKP
MLLERCQIEDIEKLFNGNKEYNVQCKYDGERFQMHMKDGKYKYFTRQGYDFTNKSGFGET
SSSGFMSSVFGQLLNPQVKSVILDGELMGWHKEKKSLGSKAMSYDVKRLSNNSHYQQCFV
AFDIIMYNDNLLINEPYEKRFEILKDTFTEKEGCLLLCKSTKISKSEELCKIFNESIKNK
EEGVVVKECNSKYKPNIRDGTGCYKIKAEYSDNLVQDVDLIILGGYYGDGKFMGLIKSFL
MGVVSSSKTPDENTKKFSSVVSVSSGLSMDKLKEFDEMFKDKWQKDRPENVIPPRTEPPD
LWIRPENSIILTIKATEMIRSNDYPIGYSLRFPRVTSVRTDKPWYDACTINDLLSLIKDT
GPVQKLTKRETDYEDIEEIPKTKICKTAKQQESVKQCSTKYKEILVKPNIFDNTPVHLTR
LFEDKEICVINGNDELSKEQIENILLQHKAKVVQNPLKENYCIIVGNAKTAKANYNIQSK
KYDIVTLDWFKRVTKEENWSSLQDFLPWDLISSRESTKRRLAQYYDDYYDHYTIDANEES
LLRSFNKIEDMGRNIKFDYAEMKKADQELFNSEISPYSLFRGIVGYFNDPSDLSKIEFRF
MAGTIRETIDDSVTNVFINNNSVNPDLQNLIGNKSLQIIKSKWIGECFKHSAIISYSEYL
IQ
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgagtagaacattagctagcgaaattgaatttaaaaatttatgtgatgtattggagaaa
atctcagaagcacatctttctagaaaagctgatattttgaagcggtttattcaaaaatgt
cgtcttatgagtcacaaattaaaaacggaatttgcaactatgaatgtttcactttatcct
atattaagattaattttaccggatcttgaacgagaacgtgatgcctataatttaaaagaa
aaatctcttgctgatctttatattcgtgtattttgtttgggaaaagacagtaaggatgca
aataaactgaaacagtacaaaattcccactgcaaaaaatattgcaggacgtgattttgca
gaaaaagcttattggattttgcagaatcgttttccacgtgaaagttctaattttacaata
gaacgaatcaatttatttctcgatgatttatcgtcaaaaaacaaaactagtctgtcaaag
aatgaaacatttaaagttttgtttggaaaaattaatgcgttagaatttaaatggataaca
cgaattattttaaaaaatttgaaacttggtattggcacgaaaaagatattgcaagttttt
catcgtgatgcaaactcactgttcaatgtatcatctaatttgcaacatgtttgtgataca
ttatatgatcctcaaatgagatatcatcatgatattcaagttttttctcactttaaacct
atgttattagaacgatgccagattgaggatatagaaaagctttttaatggcaacaaagaa
tataatgtgcaatgcaaatatgatggtgaacgatttcaaatgcatatgaaagatggaaaa
tataaatattttacaagacaaggatatgattttacaaataagtctggttttggggaaact
agttcttcaggttttatgagcagtgtatttggtcagttattaaatccacaagtaaaatca
gtaattttagatggtgaattaatgggttggcataaagaaaagaaatcgttaggttcaaaa
gcaatgagctatgatgttaaaagactctcaaacaatagtcattatcagcagtgttttgtt
gcatttgatattattatgtataatgataatttacttattaatgaaccttacgagaaaaga
tttgaaattttaaaagatacatttacggaaaaagaaggttgtcttctattatgtaaatct
actaaaatttctaaaagtgaggaattatgtaagatattcaatgaaagtattaaaaataaa
gaagaaggtgttgtagtaaaggagtgtaatagtaaatataaaccaaatataagagatgga
actggttgctataaaataaaagctgaatattccgataatttggtacaagatgtagattta
attattcttggtggttattatggtgatggaaaatttatgggtttaataaaaagtttctta
atgggagtagtttcttcatcaaaaactcctgatgagaataccaaaaaattttcatctgta
gtctcagtcagcagtggtttatccatggataaattgaaagaatttgacgagatgtttaaa
gataagtggcaaaaagatcgacctgaaaatgtgattcctcctaggactgagccgccagat
ttatggattcgccctgaaaattccattattttgactataaaagcaacagaaatgatacga
agtaatgattatccaattggatacagtttacggtttcctagagttacaagtgttagaact
gataaaccgtggtatgatgcttgtacaattaacgatttattatcattaatcaaggatacg
ggaccagttcagaaattgacgaaacgagaaacagattatgaagatatagaagaaatacct
aaaactaaaatatgtaaaacagcaaaacaacaagagtctgtaaaacaatgttcaacaaag
tataaagaaatactagtgaaaccaaacatttttgacaatacgccggttcatcttactcga
ctttttgaagataaagaaatttgtgtgataaatggcaatgatgagttatctaaagaacag
attgaaaacattcttttgcaacacaaggcaaaagttgtacaaaatcctttaaaggaaaat
tactgtattattgttggtaatgctaaaacggcaaaagcaaattataatatacaaagtaaa
aagtatgatatagtaacattggattggttcaaaagagttaccaaagaagaaaattggtcg
tcattgcaagactttttaccatgggatttaataagtagtcgcgaatcaacgaaacgacga
ttagcacaatattacgacgattattacgatcactatactatagatgctaatgaagaaagt
ttattacgttcgtttaacaaaatcgaagatatggggcgaaatattaaatttgattatgca
gaaatgaaaaaagcagatcaagaattatttaatagtgaaatatctccctattccttattt
cgaggtattgtgggatacttcaatgatccatcagatttgtcaaaaattgaatttcgtttt
atggcgggaaccattagagaaactatcgatgattctgtaacgaatgtttttatcaacaat
aattccgtgaatcctgatttgcaaaacttaattggcaataaatcgttgcaaattattaaa
agcaaatggatcggggaatgcttcaaacacagtgcaattatttcttattctgagtatctg
attcaataa

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