Fusarium venenatum: FVRRES_07216
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Entry
FVRRES_07216 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
fvn
Fusarium venenatum
Pathway
fvn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FVRRES_07216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fvn03400
]
FVRRES_07216
Enzymes [BR:
fvn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
FVRRES_07216
DNA repair and recombination proteins [BR:
fvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
FVRRES_07216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT_2
BRCT
DNA_ligase_A_C
LIG3_BRCT
DNA_ligase_IV
PTCB-BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
37258855
NCBI-ProteinID:
XP_025586500
LinkDB
All DBs
Position
II:7260054..7263060
Genome browser
AA seq
984 aa
AA seq
DB search
MSQTDDAKHEDEIQYGSMRVICEELEEKYPNRPRNHSKTFVFSELFREVFNPLNENKKQN
AAGAGPKKAFRGVNKLSPHEQRRHIVDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYG
LKENTIGKLLVKLMKIDKNSEDGYNLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQ
VGNMTIAEVNEQLDKLAASTGEMENLRVFETFYHRMNAEELMWLIRIVLKQMKVGATEKT
FLDLWHPDGDALFNVSSSLKRVCWELWNPDIRLEQDETGVALMQCFQPQLAQFQMPASFQ
KMIELLRPTEDDPEFWIEEKLDGERMQVHMIQDKSHPGGRRFCFWSRKAKDYTYLYGDGL
QDETSSLTRHLKNAFAPGVKNLILDGEMITWDMGVDKIVPFGSLKTAAISEQQNKSDTDS
AGHRPLFRVFDILYLNNKPLTQYTLRDRHRALEKAIKPVHRRLEIHNYNSATSADAIEPL
LREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVIIGGYYGTGKRG
GALSSFMCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTEGKWIEWDQQNP
PAEYIELGGGEARQFERPDVWIRPKDSIVVSVKAASVGPSEQFAQGFTLRFPRFRRLRLD
RTWNTALSLEEFQELKQRVDEESKEKAMTVEDRKRRNPKRIKRELTIAGDDITVPEFMGE
ASKLFEGLEFCVLSEALKPYKKTKTQLETIIKENGGVISQRAVAGTNMVLIGDKKVVKVA
SLIKGGDVDIIRPKWIRDCLEQDLGAFLLPFEDSHLFYATDALKSAASQNTDQFGDSYAR
DLSIEELKQVMDDMPKIEDGIPFDKNEFLQQLEEHGKDLGSLRSFTFQRCVVLLHAVEAG
DKRISRLKNLVRFGGGSVTDDANDSSVTHVVIQGDDPMQVGEAADMIRKELSSRHVQPRV
VIWAWIDECWKESTLLDEEQFVIP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaccgacgacgcaaagcatgaagatgaaatccaatatggctccatgagagta
atttgtgaagagttggaagaaaagtatccaaaccggccaaggaaccactcaaagacattt
gtattctccgagctctttcgagaagtcttcaacccgctcaatgaaaacaaaaagcagaat
gccgcgggtgcaggtcctaaaaaggcatttcgtggtgtgaacaagctctctccccacgaa
cagcgtcgacacatcgttgaccgtttcatcactcgatggcgcaaagaagttggtcctgat
ttctatcctgccttgcgcttaatccttccagataaggatcgtgaccgtggggtttatggc
ctcaaagaaaacactatcggaaaactactcgtcaagctcatgaagattgataaaaactcc
gaagatggttacaaccttttgcactggaagttgcctggccagacaatggcatctcgactg
gctggcgattttgctggacgttgtttcgaggtcatctcgaaacgaccaatgcgaactcag
gtcggcaacatgactattgccgaggtgaacgagcagctggataagcttgctgcttccacg
ggagagatggaaaatctacgtgtgtttgagactttctaccatcgcatgaatgctgaagag
cttatgtggctcattcgaatcgtcctcaagcaaatgaaagtaggcgccacggaaaaaact
ttcttagatctttggcatcctgatggcgatgctttgttcaacgtatcgtcgagcttgaag
cgtgtatgttgggaactctggaacccagacattcgtctcgaacaggatgagacaggcgtt
gctctgatgcaatgtttccaacctcagctggctcaatttcagatgcctgcctcttttcaa
aagatgatcgaactccttcgaccgactgaagacgaccccgagttctggatcgaagagaaa
ctagacggtgagcgcatgcaagtgcatatgatccaggacaagagccacccaggtggcagg
aggttttgcttctggtcacgaaaggccaaagattacacatatctttacggtgacggcctt
caagacgaaacctcaagtcttactagacatctcaaaaatgcatttgcaccaggcgtgaaa
aacctgattttggatggcgagatgattacttgggatatgggtgtcgacaagatagtgcct
tttggcagcctcaaaacagccgcaatttctgagcagcaaaacaagtcggatacagactca
gccggtcaccgtcctttatttcgagtctttgacatactctacctgaacaacaagccccta
acacagtacaccctaagggaccgacatagagccctggaaaaggccataaaacccgtacat
cgtcgactcgaaatccacaactacaacagcgcaacgagtgccgatgctatagaacctctt
cttcgtgaagttgttgccaatgcttccgagggccttgttttgaagaacccacggtccatg
taccgcctcaatagtcgaaacgatgactggctcaaagtgaagccggaatacatgtctgag
tttggagagtctcttgattgtgtcattattggtggctactacggcacaggaaaacggggt
ggcgctctatcaagtttcatgtgtggactacgtgtcacgcagaaccatatacaagctggt
gcgaatcctgaaaagtgcttcagtttcttcaaagtcggcggcggctttcgcgcagaggac
tatgcggagatccgacatcgaacagaaggcaaatggatcgaatgggatcaacaaaaccca
ccggcagagtatatcgagctgggaggaggagaggccaggcaatttgagcgtccagatgtt
tggattcgacctaaagattccattgtggtctcggtcaaagccgccagtgttggaccttcg
gaacaattcgctcaggggttcactctacgattcccccggttcagacgtcttcgactggac
cgaacctggaatactgctctctcgcttgaggaattccaagagctgaaacagcgtgtcgat
gaagaatcaaaggagaaggcgatgacggttgaggataggaagcgacgcaaccccaaacga
atcaaaagagaactcaccattgctggagatgatatcaccgttcccgagttcatgggagag
gcgtcaaaactgttcgaaggtctggaattttgtgttctttctgaagcactcaaaccctac
aaaaagaccaaaactcagcttgagaccatcatcaaggagaatggcggcgtcatctctcaa
cgagcggtagccggtacgaatatggttcttatcggcgacaaaaaagttgtgaaggtggca
agtctcataaaaggaggagacgtagacatcatccgtcccaaatggattagagattgcctt
gagcaggacttgggcgcgtttcttctgccatttgaggattcgcatctattctacgcaacc
gatgcgttgaaaagtgcggcgagccaaaacacagaccaattcggcgacagctacgcacgc
gatctatctatcgaagagcttaaacaagtcatggacgatatgccaaagatagaagacggc
ataccattcgacaaaaatgaattcctgcaacaacttgaggaacatggcaaagatctaggg
tccttgagaagctttacctttcaacgttgtgttgtgctactacatgccgtggaagctggc
gataagaggatctcgagactgaagaatcttgttaggtttggcggaggaagtgtcacagat
gacgcaaacgactcatccgtgactcatgtggtgatacaaggcgatgacccaatgcaagtg
ggcgaggcagccgatatgatacgcaaggagttgagctcaaggcatgtacaaccaagagtg
gtgatatgggcttggatcgacgagtgctggaaagagagcacgttacttgatgaagagcaa
tttgtgatcccgtaa
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