Gossypium arboreum (tree cotton): 108453979
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Entry
108453979 CDS
T05776
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108453979
03083 Polycomb repressive complex
108453979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108453979
Enzymes [BR:
gab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108453979
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108453979
HDAC complexes
Sin3A-HDAC complex
108453979
BRAF-HDAC complex
108453979
REST complex
108453979
SHIP complex
108453979
MiDAC complex
108453979
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108453979
Heterochromatin formation proteins
Other heterochromatin formation proteins
108453979
Chromatin remodeling factors
NuRD complex
108453979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108453979
NCBI-ProteinID:
XP_017607740
LinkDB
All DBs
Position
11:15639751..15644824
Genome browser
AA seq
429 aa
AA seq
DB search
MRSKEKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLAYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDMFFPGTGDVKDIGEREGKYYAINVPLKDGIDDTSFTRLFKI
IISKVVEMYRPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVKIVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPDCLLNIPNGHIENLNSKSYLSTIK
MQVLENLRSIQHAPGVQMQEVPPDFYIPDFDEDEHNPDERMDQHTQDKQIQRDDEYYDGD
NDNDHNMDM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccaaggaaaaaatatcctacttttacgacggagatgtagggagcgtatacttt
ggacctaatcatccaatgaaacctcaccggctttgtatgactcaccatttggtccttgcc
tatgacctccataaaaagatggaaatttatcgtccccacaaggcttaccccgttgaactc
gctcagttccattcagctgattatgtcgagtttttgcatcgaattacgccagatacgcag
catttgttctcgaatgaattggccagatacaatcttggagaagactgccctgtgtttgaa
aacttgtttgaattttgtcaaatttatgctggtgggacaatagatgctgcaagaagatta
aacaatcagttatgtgatattgcaataaattgggctggtggtttacatcatgccaagaag
tgtgaggcatctggcttttgttacatcaatgacttggttttgggaatcttggagcttctg
aagtatcatgcccgtgttttgtatattgatatcgatgtacatcatggtgatggggttgaa
gaagccttttatttcactgacagggtgatgactgttagttttcacaagtttggcgatatg
ttctttcctggaactggtgatgtgaaggacataggagaaagagaaggaaagtattacgcc
ataaatgtcccactcaaagatggaattgatgacactagcttcactagattgtttaagata
attatttccaaggttgttgaaatgtatcgaccaggtgcaatagttcttcaatgtggagca
gattctcttgctggggatcgcttgggctgtttcaatctctcaattgatggacatgctgaa
tgtgttaaaattgtgaagaaattcaacctacctttactggttaccggaggcggaggatat
actaaagaaaatgttgcacgttgctggactgttgaaacaggagttcttttagatacagaa
cttcctaatgaaatcccagaaaatgagtatatcaaatattttgcaccagattgcttgttg
aatattccaaatgggcacatagagaatttgaatagcaagtcatatcttagtacgatcaag
atgcaagtgctggaaaaccttcgtagcatccaacatgctccaggtgtacagatgcaggag
gttccacctgatttttatattcctgattttgatgaagatgagcataatcctgatgagcgc
atggatcagcacacccaagacaagcaaatccagcgtgatgatgaatattacgatggtgac
aacgataatgatcataacatggacatgtga
DBGET
integrated database retrieval system