Gossypium arboreum (tree cotton): 108454181
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Entry
108454181 CDS
T05776
Name
(RefSeq) ALG-2 interacting protein X-like
KO
K12200
programmed cell death 6-interacting protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03250
Viral life cycle - HIV-1
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108454181
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108454181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108454181
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108454181
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
108454181
Exosome [BR:
gab04147
]
Exosomal proteins
Proteins found in most exosomes
108454181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
108454181
NCBI-ProteinID:
XP_017608038
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Position
11:22900000..22904894
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AA seq
634 aa
AA seq
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MASASSSSATVTNLMLAIYEKKTNSIDLYRPLRQYICFTYSEREAVNLEDDLSTVKTLRS
DIERVPDPAPTTRRDLLTSYFKALCLIETRFPISSDRDHINSIQFTWFDAFKQKQKAVQQ
NIHLEKAAILFNLGAVYSQIGLSYDRATVEGRRQASHAFIAAAGSFAFLRDNASTKASMG
NSTTVDLSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALN
AAPLKDHFEKAWIAHVQLKAALFYAEACYRYGLELHEKEEIAEEIARLRSGVSTLTETKK
SSKGAPAQLLDAISKLEVNLNRNLERAMKENDRVYLMRVPSPSSLPPLPAFSMVKSMQMN
DVLDASKEKIFASLVPDSSAKALSRYTEMADDVIRTQAEKLQQGSELTRVRLKEMDLPDS
ILALEGNFSLPEDLKNEVEKVQASGGPAGLEGELQQLRDLRRVNQELLVQTEELLQKEAA
EDAQFRSQFGTRWTRPQSSTLTKTLQERLNKFAANLKQAGESDVRIERSVREHASLMSIL
NHRPIEAALPSLSRPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKVKL
TVCAMYFLHAFLIIYHLNQCARHSVSLLFYLNGT
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcgtcctcctcctcggcgacagttaccaacctcatgctagcaatctatgag
aaaaaaaccaattccatcgacctctaccgccctctccgccaatacatatgcttcacatac
tccgaacgcgaagccgtcaacctcgaagatgacctttccaccgtcaaaaccctccgctct
gacatcgaacgcgttcccgacccagccccaacaacccgacgcgacctcctcacctcttac
ttcaaagccctatgcctaattgaaacccgtttcccaatttcctccgatagagatcacatc
aattcaatccaattcacttggtttgacgcatttaagcagaagcaaaaagcggttcaacaa
aacatccatttagaaaaagccgccattttgtttaatctcggggctgtttatagtcagatt
ggcttgtcttacgatagggctacggtggaagggaggagacaagcgtctcatgcgtttatc
gcggcggctgggtcgtttgccttcctcagagataatgcgtcgacaaaggcgtccatgggg
aacagtacgaccgtcgatttgtcggtggagtgtgctgggatgttggagaggttgatgttg
gctcaagctcaagagtgtgtttttgaaaataccatcgctaaaggaagtactcctggagtt
tgcgccaagatttctaggcaggttggactatactatgaggaagctttagccgcattaaat
gcagctcctttgaaggaccattttgaaaaagcatggattgcacatgtgcagcttaaggca
gctcttttttatgcagaagcttgctataggtatggtttggagctacatgagaaggaagag
attgcagaagaaattgcccgtttgaggagtggagttagtactttaactgagacaaagaaa
tcatcaaaaggggctcctgcacagcttctggatgcaattagcaagttagaagttaatctt
aatcgcaacctggagagggctatgaaggaaaatgacagggtttatcttatgagggttcct
tctcctagttccttacctcctctccctgcattttcgatggtgaagtcgatgcaaatgaat
gatgtgttggatgcaagcaaggagaagatatttgcaagtcttgttcctgacagcagtgca
aaggctctttccaggtatactgaaatggctgatgatgtcatcaggacacaggctgagaaa
ttgcagcaaggaagtgagctaacccgtgttaggcttaaggaaatggacttgccagattca
attcttgctctggaagggaattttagtcttccagaagatcttaagaatgaagtagaaaag
gtgcaagctagtgggggcccagctggtctggagggtgagttacaacaacttagggatcta
aggagggtcaatcaggaattgctggtacagactgaggagcttttgcagaaagaagctgca
gaggatgctcagtttagaagtcagtttggaacacgatggaccaggccacagtcaagcact
ctgacaaagactttgcaggaaaggttaaataaatttgctgctaacttaaagcaagctggc
gaaagtgatgttcgaattgagcgttcagtgagagagcatgcttcactgatgtcaatcctt
aaccacagaccgatagaagctgccctaccaagtctttcaaggccaataatgtctttggat
gccaatgaagatgctatagttggggccctgaagcagagcttgaggcaattagagactcta
ggtgctcagagggcgggccttgaagacatgcttaaagagatgaaaagaaaggtgaagtta
actgtttgtgctatgtattttctgcatgcttttcttattatatatcaccttaaccagtgt
gctaggcattctgtttcactgttattttatctaaatggtacctga
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