Gossypium arboreum (tree cotton): 108460262
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Entry
108460262 CDS
T05776
Name
(RefSeq) exocyst complex component SEC8
KO
K06111
exocyst complex component 4
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108460262
Membrane trafficking [BR:
gab04131
]
Exocytosis
Tethering complex
Exocyst complex
108460262
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec8_N
EXOC6_Sec15_N
Sec8_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
108460262
NCBI-ProteinID:
XP_017615188
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Position
12:137231814..137252756
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AA seq
1058 aa
AA seq
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MGIFDGFPIPPDKEHLRDELSRIDESWASARFDSLPHVVRILTSKDREGELQFLKEQSDV
VEDVVDEVVHAYHGGFNKAIQNYSQILRLFSESSESIGVLKVDLSEAKKCLGVRNKQLHQ
LWYRSVTLRHIISLLDQIEGIAKVPARIEKLISDNQLYAAAQSLVQSVLMLEREGLQTVG
ALQDVRSDLSKLRSVLFYKVLEDLHAHLYNKGEYSSITSSLHEKDDEVPTTTAVACTANT
SHPGSRRTRSVRGDGMFGSQGTVDGSYRPGSIDGGSSYDGHDEDGYLEPHDNVGDAKDAK
VVSHQIPLWLSSSTPDEFVETIKKSDAPLHVKYLQTMVECLCLLNKVAAAGAVISQRLRP
TIHEIITSKIKAHAEFANSSRSGNDKATRIGNSTLHFINGQLGSYQLPKQKRQNGMSLAG
TVLAVSPVSLVMAPTGKAQAAAKELLDSILESVVRIFENHVVVGELIQSKSSLQSDPNAQ
KSMSTNLNLDSEASQVTGGYSIGFSLTVLQSECQQLICEILRATPEAASADASQTARLAS
KVPTNEKRDGSEDTLTFAFRFTDATVSVPNQGVDLIRQGWNKKGPNVSQEGYGSATVLPE
QGIYLAASLYRPVHQFTDKIASMLPKKYSQLGNDGLLAFVENFVKDHLLPTMFVDYRKSV
QQAISSPAAFRPRANPYVSYNSSIEKGRPVLQGLHAIDFLAKEVLGWAQAMPKFAAELVK
FVQTFLERTFERCRTSYMEAVLEKQSYMVVGRHDIDKLMRRDPASACLPNALGQPNMGNI
VSDMESMEIESELNELLLNLRPIRQDNLIRDDHKLVLLASLSDSLEYVADSIERLVQSTP
LAAPNNVESGKPSNKQTSSSPARDLASFADEYRKLAIDCLKVLRVEMQLETIFHLQEMTS
REYLDNQDAEEPDDFVISLTAQIARRDEEIAPFVAGVKRNYIFGGICSIAANASLKALAD
MKSINLFGVQQICRNSIALGQALAAIPSIDSEAVQQRLDHVRTYYELLNMPFEALLAFIT
EHEHLFTAAEYANLLKVQVPGREIPPDAQDRISDILSR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggggatttttgatggatttcccattcctccagataaagaacacttaagggatgaactt
tctagaatagatgagagttgggcaagtgcacgttttgattcactacctcatgttgtccgt
atcctgacatcaaaagatcgtgaaggcgagctccagtttttaaaggaacaaagcgatgtt
gtcgaggatgttgtagatgaagttgtgcatgcttatcacgggggattcaacaaagcaatt
caaaattattctcagatcttgcggttattcagtgaatcttctgaaagcattggtgtctta
aaggttgacttgtctgaggctaaaaaatgtctaggtgtacggaataaacaattgcaccag
ttgtggtatcgatcagttacattgcgtcacataatttccttgttagatcagattgagggc
atagctaaggttcctgctcgtattgagaagctcatttctgataatcaactttatgctgca
gctcaatcgcttgttcagtctgtattgatgcttgagcgagagggcctccaaacggttggt
gctcttcaagatgttcgatctgatctgtcaaagttgcgaagtgttctgttctataaagtt
ttggaggatttgcatgcacatctttacaataagggtgaatacagctcaattacgtcaagc
ttgcatgaaaaggatgatgaagtccctacaaccacagctgttgcatgcactgcaaatact
tcgcatcctggctctcgaagaaccaggtcagtgagaggtgatggtatgtttggcagtcag
ggaactgtagatgggtcatacaggccaggttccattgatgggggttcatcatatgatggc
catgatgaggatggctatttggagccacatgataatgttggtgatgcaaaagatgccaaa
gtcgtatcccatcaaatcccattgtggctttcaagttcgactcccgatgaatttgttgaa
acaattaaaaagagtgatgctccacttcatgtgaagtatttgcagaccatggtggagtgc
ctctgcttgcttaacaaagtagctgcagctggggctgtaataagccaacgattgcgaccc
acaattcatgagattatcacttccaagattaaagcgcatgcagaattcgctaattcttca
aggtctggaaatgataaggccactcgaattggtaactccactctgcactttataaatgga
cagttaggaagctatcagttgcctaaacagaagcgtcagaatgggatgtcattggctggg
actgtgttggcagtgagccctgtctcccttgtgatggctcctacaggaaaagcacaagct
gctgcaaaagaacttcttgattcaattttggagtctgttgttcggatatttgagaatcat
gttgttgttggagagcttattcagtcaaaatcttccctacaaagtgacccaaatgcacaa
aagtcaatgtcaacaaatttaaacctggattctgaagcatctcaagttactggaggctat
agtattggcttttccttgacagttttacagagtgaatgccaacaactcatttgcgagatt
cttcgagcaacccctgaggctgcatcagcagatgcctcacaaactgccaggcttgcaagc
aaggttcctacaaatgaaaagagggatgggtcagaagacacactcacttttgctttccgt
ttcacagatgctaccgtttcagttccgaaccagggcgttgatctcattcgccaaggatgg
aataagaagggtcccaatgtttcacaagaaggttatggctctgcaactgtcttgcctgag
caaggcatttatctagcagcatctttataccggcccgttcatcagtttacagacaagatt
gcttctatgctgccaaaaaaatattcccagcttgggaatgatgggttgctagcctttgtg
gagaactttgtgaaagaccatcttttgccaactatgtttgttgattaccggaaaagtgta
caacaagctatatcaagtccagctgcatttcggccacgggcaaatccctatgtttcatat
aattcatccattgagaaaggtcgacctgtcttgcaggggcttcacgctattgatttctta
gcaaaagaggtgcttggttgggctcaagcaatgcctaaatttgcagctgaacttgtgaag
tttgtgcaaactttccttgaacgaacctttgaaagatgtcgaacttcatacatggaggca
gttcttgagaagcagagttatatggtcgttggaaggcatgatattgataaattgatgcga
cgtgatccagctagtgcatgcttaccgaatgcgcttggtcagccaaatatgggaaatatt
gtttctgatatggaaagtatggagattgaatcagaactaaatgaactcctcttaaatttg
cgtcctattaggcaggataatctaatccgtgatgaccataaacttgttttgctggcatcc
ctgagtgattcattggagtatgttgcagactccatcgaaagacttgtacagtcgacccca
ctagcagcaccaaacaatgtggagagtggcaagcctagcaataaacaaacaagcagttca
ccagctagggatctggcatcatttgcagatgagtacagaaaactagctatcgattgcttg
aaagttttacgcgtggagatgcagctggagacaattttccacttgcaggaaatgacatct
agggaatacctggacaaccaggatgcggaagagcctgatgactttgttatttcacttact
gcgcagatagcacgcagggatgaggaaatagctccttttgttgctggagtgaagcgtaat
tatatttttggtggaatatgtagcattgccgcaaatgcatcacttaaggctttggctgac
atgaaatcgatcaatttgtttggagttcagcagatatgtcggaattcaattgctctagga
caggccctcgcagctatcccttcaattgacagcgaagctgtacagcagagacttgatcat
gtccgaacctattatgaactgttaaatatgccattcgaggccttgcttgccttcattacc
gagcacgagcacttgtttacagctgcagagtatgctaatcttctaaaagtccaagtccct
ggaagggagatacctcctgatgcacaagatcgaatatcagatattttatcacgttag
DBGET
integrated database retrieval system
