Gossypium arboreum (tree cotton): 108463940
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Entry
108463940 CDS
T05776
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108463940
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108463940
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108463940
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108463940
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108463940
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108463940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
SASP
Motif
Other DBs
NCBI-GeneID:
108463940
NCBI-ProteinID:
XP_017619447
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All DBs
Position
13:130722390..130733716
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AA seq
1114 aa
AA seq
DB search
MTLMTTPPVDQEDEEMLVPHTDIVEGPQPMEVSQVEPANTNENQQVEEPQSMKFTWTIEN
FSRLNTKKHYSDIFVVGGYKWRILIFPKGNNVDHLSMYLDVADSSALPYGWSRYAQFSLA
VVNQVHHKYSIRKDTQHQFNARESDWGFTPFMPLSDLYDPSKGYIVNDTVVVEAEVVVRK
ILDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPIGSIP
LALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVE
GTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDN
KYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED
RKYLSPDADTSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDMKR
ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIVCDVDEKDIAEHLK
IRLKKEQEEEDDKRRYKAQAHLYTIIKVARDEDLLEQIGKDIYFDLVDHDKVRSFRIQKQ
TPFNEFKEELAKEFGIPVQYQRYWIWAKRQNHTYRPNRPLTPQEEAQPVGQLRDMSNKAH
NAELKLFLEVGRGPDLRPVPPPDKTREDIMLFFKLYDAEKGELRYVGRLLVKLSGKPIEN
ITKLNQMAGFAPDEEIELYEEIKFEPCVMCEHLDKRCSFRLSQIEDGDIICFQKSLPIAS
EEACQYPDVPSFLEYVHNRQIVHFRFLERPKEDDFCLELSKIHTYDDVVERVAYKIGLDD
PSKIRLTSHNCYSQQPKPQPIKYRGVETLSEMLIHYNQTSDILYYEVLDIPLPELQGLKN
LKVAFHHATKDEVVIHNIRLPKQSTVGDVIDELKTKVELSHPNAELRLLEVFYHKIYKIF
PPSEKIENINDQYWTLRAEEVPEEEKNLGPNNRLIHVYHFNKETAQNQMQVQNFGEPFFL
VIHEGETLAEVKLRIQKKLQVSDEEFSKWKFAFMSLGQPEYLQDSDIVFKRFQRRDVYGA
WEQYLGLEHSDTSPRRTYVNQNRNTFEKPVKIYN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgactttgatgactactccgccggtagatcaagaagacgaggagatgctcgtgccgcat
acggatattgttgaaggacctcagccaatggaagtttctcaagtcgagcctgctaacaca
aatgagaatcagcaagtggaggaacctcaatcaatgaaattcacttggacaattgagaat
ttttctaggctgaacaccaagaagcactattcagatatatttgttgttggtggttataaa
tggcggatactaatttttccaaagggaaacaatgtggaccacttgtcaatgtacctagat
gttgcggattcttctgcattgccatatggttggagtagatatgctcaatttagcttggcg
gtggttaatcaagtccatcacaagtattcaataagaaaggacactcaacaccagttcaat
gcaagagagagtgattggggtttcacaccatttatgcctctcagtgatctttatgaccct
agtaaagggtatattgtgaatgatactgttgttgttgaagctgaggttgttgtccgtaag
atattggattattggtcatatgactcaaagaaagagactggttttgttggacttaagaac
caaggagcaacttgttacatgaactcgcttctgcagaccctataccatataccatacttc
agaaaggctgtgtaccacatgccaacaactgaaaatgacatgcctataggaagcattcct
ttggctctgcagagtttattttacaagcttcaatataatgacactagtgttgcaacaaag
gagttgaccaaatcttttggatgggatacatatgattccttcatgcaacatgatgtacaa
gaactcaacagagtcttgtgtgaaaagcttgaagataaaatgaagggaactgttgtagag
gggacaatacagaagttgtttgagggtcaccatatgaattatattgaatgcatcaatgtg
gattacaagtctacaagaaaggaatcattttatgaccttcagcttgacgtcaaaggatgt
cgggatgtttatgcttcttttgataagtatgtggaagttgagcgccttgagggtgacaat
aaatatcatgctgaagaacatggcttacaggatgcgaagaaaggtgtcttatttattgac
tttccccctgttcttcagcttcagctaaagcgttttgagtatgattttatgcgggataca
atggtaaagataaacgaccgctatgaatttcctcttcagcttgaccttgatagagaagat
cggaagtatctatcacctgatgctgatacgagtgttcgcaacctttacactctccacagt
gtcttagttcatagtggaggagtacatggtggacattattatgcttttatcaggccgacc
ctttctgaccaatggtataaatttgatgacgaacgggtaacgaaagaagatatgaagagg
gcattggaagagcagtatggtggtgaggaagagttgccacagacaaatcctggcttcaat
aacacacctttcaaatttacaaaatactcaaatgcatacatgcttgtttatatacgtgaa
agtgataaggacaaaatagtttgcgatgttgatgagaaggacattgctgaacatttgaag
ataaggttaaagaaagaacaggaagaggaggacgataaaaggagatataaagcacaggct
cacctttatactattataaaggttgcaagagacgaagatcttctagaacagattggaaag
gacatatattttgatcttgtggatcatgacaaagttaggagtttccgtattcagaagcag
acacctttcaatgaatttaaggaggaacttgcaaaagagtttggcataccagtgcaatat
caacgttactggatttgggctaagaggcagaaccatacatatcgtccgaatcgaccttta
acccctcaggaggaggctcagcctgttggacagttgagggatatgtcaaataaggctcat
aatgcagaactaaaactgttcttggaagttgggcgtggaccggatttacggcctgttcct
ccacctgacaaaactagggaagatattatgcttttcttcaagctttatgacgctgagaaa
ggagaattacgttatgttggtaggctcttggtaaaactttctggcaagccaatagaaaat
ataaccaagctaaatcaaatggctggctttgctcctgatgaagaaattgaactttatgag
gaaataaagtttgagccttgtgtgatgtgtgagcatcttgataaaagatgttcattccgg
ttaagtcagattgaagatggggatattatatgctttcagaagtctcttccaattgcaagt
gaagaagcatgccaatatccagatgtgccttcatttctggagtacgtgcacaatcgtcag
attgttcattttcgttttctggagagaccaaaggaagatgatttctgtctagagttgtca
aagatacatacttatgatgatgttgtggaaagagtagcttacaaaattggtctggatgat
ccatccaaaatcaggctcacatctcacaactgctactctcaacagcctaagcctcaacct
attaaataccgaggagtagagactctgtcagaaatgttgatccactataatcagacttct
gacattttgtattatgaagttctggatatccctttgccagaattgcaaggtctgaaaaac
ctgaaagttgctttccatcatgctactaaggatgaagtggtaattcataatattagattg
cccaaacagagcactgttggagatgtgattgatgaacttaagactaaggtggagttgtca
catcctaatgcagagcttagattgcttgaagtcttctatcacaagatctacaagatcttt
ccacccagtgaaaagattgagaacataaatgatcagtattggacattgcgtgcagaagag
gtcccagaagaagaaaagaatcttggtcccaataatcgattgattcatgtctaccatttt
aataaagagactgcccagaaccagatgcaagtgcaaaattttggtgagccctttttcttg
gtcattcatgaaggtgaaactctagcggaagttaaattgcggatacaaaagaaattgcaa
gtttctgatgaagagttctccaagtggaagtttgcatttatgtcattgggccaaccagag
tatctacaagactctgacattgtgttcaaacgttttcagagaagagatgtttatggggct
tgggagcaataccttggtttagagcattctgatacctctcctagaaggacttatgttaat
cagaaccgtaacacatttgagaaaccagttaaaatatacaactag
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