KEGG   Gossypium arboreum (tree cotton): 108465218
Entry
108465218         CDS       T05776                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Module
gab_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108465218
Enzymes [BR:gab01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     108465218
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 108465218
NCBI-ProteinID: XP_017621030
LinkDB
Position
Unknown
AA seq 412 aa
MAFQFNFVSSMLILLLLSISSAKGQGGGGGGVIDVVAKFGAKADEKTDLSKPLLDAWKEA
CASTSPAKIVIPKGIYFLSTATLDGPCKAPIELQVEGTVKAPADPGAFKEPKWIAFNRIE
NFKLFGGGVFDGQGTTAYKREGCEKHDYCDSLPINLRFDFLTNTMVQGITSKDSKQFHVN
VLGCKNITFEHFTVSAPGESPNTDGIHIGRSDGVNVLNTDIKTGDDCVSIGDGSKNLVIN
GVTCGPGHGISIGSLGLFKNEEPVDGVIVKNCTLTNTSNGVRIKSWPGAEPGSCSNIHFE
DITVTNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSALPEAVKIICSATLP
CENVELADIEIMLSGPAGPAVSQCSNVKPKVSGKQNPVACSAPIGAKPTLAA
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggcttttcaatttaattttgtttcatccatgttaatactattacttttatccatatca
tctgctaaaggtcaaggaggaggaggtggtggtgttattgatgttgttgcaaaatttggt
gcaaaggcagacgagaaaacagatttgagtaagccattgttggatgcttggaaagaagca
tgtgcctcgacatctccagcaaaaattgtgattcctaaaggtatatattttttaagtaca
gctaccttagatggtccttgcaaggctcctattgagcttcaagttgaaggcactgtgaag
gctccggcagaccctggtgctttcaaggagcctaaatggattgccttcaatagaattgaa
aatttcaaattgtttggtggaggagttttcgacggccagggaaccactgcttataaaagg
gaaggttgcgaaaagcatgattattgtgattcacttcctattaatctaaggtttgatttt
ttaaccaacacaatggtacaaggtataactagcaaagatagtaagcagttccacgttaat
gttctaggatgcaaaaacattacttttgaacatttcaccgtatctgcacctggagaaagc
ccaaacacagatgggattcacatcgggagatcagatggggttaatgttcttaacacggac
ataaaaactggtgatgattgtgtttcaattggggatggttccaaaaatttggttatcaat
ggagtaacttgtggaccaggacatggtatcagtattggcagtctcggattgtttaaaaat
gaagaacccgttgatggagttatagtaaaaaactgcaccttgactaatacttcaaatggt
gttagaatcaaaagttggccaggtgctgaacccggctcttgttcgaacattcactttgag
gatattactgtgaccaatgtcagttctcctattataattgatcagaaatattgcccatgg
aacaaatgcaaaataaatgaagaatcaaaagttaaactaagcaacattagtttcaaaaac
attcacggcacttctgcgctaccagaagctgtcaagattatttgcagcgctactttgccg
tgtgaaaatgtggaacttgccgacattgaaattatgctcagtggaccggctggacctgca
gtatcacaatgttcaaatgtgaagcctaaagttagtggcaaacaaaatccagttgcatgt
tccgcccctatcggagcaaaacctaccctggctgcttaa

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