Gossypium arboreum (tree cotton): 108466062
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Entry
108466062 CDS
T05776
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108466062
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108466062
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
RRM_9
DUF5484
Motif
Other DBs
NCBI-GeneID:
108466062
NCBI-ProteinID:
XP_017621920
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MASMRLLAIIAILVQGLVNGDSHELPSFDPELAVAKVWEVAEGKVGPDVKVFNVVDFGAK
PDGTTISTINFIRAFKAACNHNGRAMLVIPEGNFLLGSMLLSGPCTFQPPLMVQFNGNLL
PQGSTSTAENADWITFINFNGLFISGKGTINGLGEKEAWKAVCDGCRRKAANLKLIKLND
VLISGITSVNAKGFHMMISVCNNFVITNVNISAPDESPNTDGIHMSKTNKVRISNSTIGT
GDDCVSMIHGTTNVTVENVKCGPGHGFSIGSLGHYDAEFDVFGITVRNCSLAYTENGARI
KTYRNESPSKASGIIFQDLTMDHVKNPILIDQEYATIPGSV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatgaggctccttgcaataattgccattctggttcagggcttagttaatggt
gattctcacgagttgcctagtttcgatccggaactagccgtagccaaagtttgggaagtt
gctgaaggcaaggtcggccctgatgttaaagtttttaatgtggtggatttcggtgccaag
cccgatggaaccaccattagcactatcaattttattagggcattcaaagcagcttgcaat
cacaatggccgtgcaatgctggtgatccctgagggaaatttcttattaggatcgatgtta
ttgtccggaccttgcacttttcaacctccgctgatggttcaattcaacggaaaccttttg
ccgcaaggttcaacgtccacggccgaaaatgcagactggatcacattcataaactttaat
ggcttgttcataagtggaaaaggtaccatcaatggcctaggcgagaaggaggcatggaag
gctgtatgcgatggttgccgtcgaaaggctgctaatttgaagttaatcaagttgaacgac
gtgctcattagtggcattacctccgtcaacgctaaagggttccatatgatgatcagcgtt
tgcaacaacttcgtgatcaccaacgttaatatatcggctccggatgaaagccccaacacg
gacggtattcacatgagcaaaacaaataaggtcagaataagcaacagtaccatcggcact
ggcgacgattgtgtctcaatgatccatggaaccaccaacgtcaccgttgagaacgtcaaa
tgtggccccggacacggattcagtattggtagtcttggacactacgatgctgagttcgat
gtttttgggatcaccgtgaggaattgctcactagcctacacagaaaatggtgcaagaatc
aaaacatacagaaatgaaagtccatctaaagcttcgggcattattttccaagatctcact
atggaccatgttaagaaccctattctcatcgatcaagaatatgcaacgattccaggcagt
gtg
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