Gossypium arboreum (tree cotton): 108466421
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Entry
108466421 CDS
T05776
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108466421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108466421
04147 Exosome [BR:
gab04147
]
108466421
04090 CD molecules [BR:
gab04090
]
108466421
Enzymes [BR:
gab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108466421
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108466421
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108466421
CD molecules [BR:
gab04090
]
Proteins
108466421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_30
AAA_21
AAA_16
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_15
ABC_ATPase
AAA_25
AAA_23
DLIC
AAA_28
AAA_19
Motif
Other DBs
NCBI-GeneID:
108466421
NCBI-ProteinID:
XP_017622234
UniProt:
A0A0B0MNC0
LinkDB
All DBs
Position
1:complement(124971385..124977204)
Genome browser
AA seq
1260 aa
AA seq
DB search
MDDDQREKLKTGAVKKVNGPIRSIFMHADAVDLWLMTLGFIGAVGDGFSTPLVLLVTGKL
MNNFGDASAVTSDTFIQNINKNSVALLYLACGSWFACFLEGFCWSRTGERQATRMRARYL
KAVLRQDVGYFDLHVSSTAEVITSVSNDSLVIQDVLSEKVPNFLMNVAIFVGCYMVAFIM
LWRLAIVGFPFAVLLVIPGLMYGRGLIGIARKIREEYNKAGTIAEQAISSIRTVYAFVGE
TKTIAEFSAALQGSVKLGLKQGLAKGLAIGSNGVVFATWSFMAYYGSRMVMYQGAKGGTV
FIVGAAIAMGGLALGASLSNLKYFSEACSAGERIMEVIRRVPKIDSDNLEGEIMEKFSGS
VEFKHVEFAYPSRPETMILKDFSLTIPAGKTVALVGGSGSGKSTVIALLQRFYDPLGGEI
LLGGVAIDKLQVKWLRSQMGLVSQEPALFATTIKENILFGKEDATMEEIIEAAKASNAHN
FICQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKAPQILLLDEATSALDSESERVVQE
AIDQASIGRTTIVIAHRLSTIRNADLIAVFQNGQVIEIGSHDELIENQNGHYTSLVHLQQ
TEKEMNPEEANSTLPTCASSSITNMDINNTSSRRLSLVSGSSSANSFSQNRAPLAGDSVV
EDQEKLPVPSFRRLLALNLPEWKQAMMGCSCAILFGAVQPVYAFSLGSMISVYFLTNHDE
IKEKTKIYALCFLGLSVFSFLINVGQHYNFAYMGEYLTKRIRERMLSKILTFEVGWLDQD
ENSSGAICSRLAKDANVVRSLVGDRMALVVQTISAVTIAFTMGLVIAWRLALVMIAVQPI
IIVCFYARRVLLKSMSQKAIKAQEESSKLAAEAVSNLRTITAFSSQDRILKMLDKAQEGP
RRESIRQSWFAGIGLGTSTSLTTCTWALDFWYGGKLMSHGYITAKALFETFMILVSTGRV
IADAGSMTSDLAKGSDAVGSVFAILDRYTRIEPEDPDGYKPEKITGHVELRDIDFAYPAR
PDIMIFKGFSLKIEAGKSTALVGQSGSGKSTIIGLIERFYDPLEGAVKIDGRDIRSYHLR
SLRKHIALVSQEPTLFAGTIRENIAYGASDETDEAEIIEAARAANCHDFISGLKDGYHTW
CGDRGVQLSGGQKQRIAIARAILRNPAILLLDEATSALDSQSEKAVQDALERVMVGRTSV
IVAHRLSTIQNCDQIAVLDKGKVIEKGTHQSLLAKGPIGAYFSLVNLQRGPHNNTAHSIN
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatcagagagagaagctgaaaactggtgcagtcaagaaagtaaatgggcct
ataaggtccatattcatgcatgctgacgctgtggatttgtggttgatgactctcggcttc
atcggcgccgtcggtgatggtttcagtacacctcttgttttgcttgttactggcaagtta
atgaacaattttggtgatgcttcagctgtcacttcagacacgttcattcaaaatatcaac
aagaactcggtggctcttttgtatttggcttgtgggtcatggtttgcttgttttctagag
gggttttgttggtcaagaacaggtgaaagacaagcaactagaatgagagccagatatctg
aaagcagttttaagacaagatgtggggtactttgatttgcatgttagcagcacagctgaa
gtgatcactagtgtttcaaatgacagcctagtaatccaagatgtcctcagtgaaaaggta
ccaaattttctgatgaatgttgcaatatttgtggggtgctacatggtagcatttataatg
ctgtggagactagcaatagtaggctttccttttgctgtgcttctggtgattcctggttta
atgtatggaaggggattgataggaatagctagaaagataagggaggaatataacaaagct
ggtacaatagcagaacaggcaatatcttctataagaacagtttatgcctttgttggtgag
accaaaaccattgcagaattctcagcagctttacaagggtcagtcaagttggggttaaag
caaggtttggctaaaggtctagcaattggaagcaatggggtggtttttgcaacttggtcg
ttcatggcttattatggtagtaggatggtcatgtaccagggtgctaaaggaggaactgtt
ttcattgtcggtgcagccattgccatgggaggcttggcattgggggctagtttgtcaaac
ctgaagtatttctctgaagcatgttcagctggggagaggataatggaagtgataagaagg
gtccctaagattgattcagacaatttagaaggtgaaatcatggaaaaattttcaggatcc
gtggaattcaagcatgttgaatttgcatatccatcaaggcctgaaaccatgattctcaaa
gatttttccctaaccattccagctggaaagactgtggcattagtgggtgggagtggctcg
gggaaatccacagtcatagcactactgcaaaggttttatgacccactagggggagagata
ctccttggtggggtcgccattgataagttgcaggtcaagtggctaaggtcacaaatgggt
ttggtgagtcaggagccagcactttttgcaacaaccataaaggagaacatactttttggc
aaggaagatgctaccatggaagagattatcgaagctgccaaagcctcaaatgcccacaat
ttcatctgccaattgccacagggttatgacactcaggttggcgaaagaggagttcaaatg
tcaggaggacaaaagcaaagaattgctatagcaagagcaattataaaagcaccccaaatc
cttcttttagatgaggcaacaagtgcactagactcggaatctgaacgagtggtgcaagaa
gcaatagaccaagcctccattggccgaaccaccatagtaatcgcccaccgcctctctaca
atccgcaacgctgaccttatagcagttttccaaaatggccaggttatagaaattggatca
catgatgagctgatagaaaatcaaaatggtcattacacttcattagtccaccttcaacaa
acagagaaagaaatgaaccctgaagaagctaactcaactttacctacttgtgcttcatct
tcaatcacaaatatggatatcaacaacacaagtagtagaaggctttcattggttagtgga
tcaagttctgccaattctttttctcaaaaccgtgctccactggctggcgattccgtggtg
gaagatcaagaaaaattgccagtcccctcttttagaagattgttggcattgaacttacca
gaatggaaacaagcaatgatgggatgttcatgtgcaatcctatttggtgcagtacaacct
gtttatgcattctcactaggatctatgatatcagtatattttctgactaatcatgatgag
atcaaggaaaagactaagatctatgccttatgctttctcgggttgtcggtgttttcattt
ctgattaatgttggccaacattataattttgcatacatgggagagtacttgacaaagagg
attagagagcgcatgctttcaaagatactcactttcgaagtaggctggcttgatcaagat
gagaattcaagtggggctatttgctctagacttgccaaggatgccaatgtggtgagatct
ttggttggtgacagaatggcactagttgttcaaaccatttcagcagtaaccatagctttc
accatggggctggtcatagcttggaggcttgcacttgtgatgatagcggtccaaccaatc
attatcgtttgtttctacgcgagacgtgtcttgcttaaaagcatgtctcagaaggctatc
aaagcccaagaggaaagcagcaagctagctgcagaggcagtttccaacctccgaaccatc
actgccttctcctcccaagaccgaatcctgaaaatgctcgacaaagcccaagaaggccca
cgaagagagagcattcgccaatcatggttcgctggtattggccttggcacatcaacaagc
ctaacaacttgtacttgggccttagacttttggtatggtggtaaacttatgtcacatggc
tacatcactgcaaaggctttgtttgaaaccttcatgatcttagtaagcacaggtcgagta
atagccgatgcaggaagcatgacttctgaccttgcgaagggctcagatgcagttggatca
gtctttgctatattggatcgatacactagaattgaacctgaagaccctgacggttacaaa
cccgaaaagataacaggccatgtagaacttcgcgacatagacttcgcgtaccccgcccga
ccagatattatgatctttaaaggcttctcactcaaaattgaagcaggtaaatcaacagca
ttggtaggacaaagcgggtcgggtaagtcaaccatcatcggattaattgagagattttat
gatcctcttgagggagcagtgaagattgatggtagagatataaggtcataccaccttagg
tcgctaaggaaacacattgcacttgttagccaagagcccacattatttgctggtacaatc
cgagaaaacattgcatatggtgcatctgatgagacagatgaagcagagatcattgaggca
gctagagcagccaattgccatgatttcatttcagggttaaaagatgggtatcatacatgg
tgtggtgacaggggagttcagctatctggtggccaaaagcaacgcattgcaatagcaaga
gccatattgagaaaccctgcaattttactcttagatgaggcaaccagtgcccttgacagt
caatcagagaaagcagtacaagatgcacttgaaagagtaatggtggggagaaccagtgtg
attgtggcacataggttaagcaccattcagaactgtgaccaaattgcagtgttggataaa
ggcaaggttatagagaaagggacccatcaatctttgttggctaaaggacccattggagca
tacttctcattggttaatctccaaaggggaccccacaacaacactgctcactccatcaac
taa
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