Gossypium arboreum (tree cotton): 108469904
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Entry
108469904 CDS
T05776
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33B-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108469904
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108469904
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xpo1
Motif
Other DBs
NCBI-GeneID:
108469904
NCBI-ProteinID:
XP_017626502
UniProt:
A0A0B0N988
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Position
3:26659790..26670190
Genome browser
AA seq
1322 aa
AA seq
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MEVGPVWESVLEQTKSAQDKNSDPLVWAVQLSSRLNSAGVSLPSIDLAHLLVSHICWDNH
LPITWKFLEKALTANFVPPMLVLALLSTRVIPKRKFHPTAYRLYMELLRRHAFPLKCQIN
GQNYQKIMKSIDDVLHLSLIFGVQVSEPGLLLVEFVFSIVWQLLDASLDDEGLLELTPEK
RSIWPTVTQDMEIDTADNFNETRSAHHDVLYKGNTMIAIEIIGEFLQNKVTSRILFLARR
NMPSHWEAFIQQLRVLAAKSVELRNSKHITPENLLQLTSDTHNVLSRECKRISQQALHAV
MGDGSLTSPSGQWHGTSPSALWLPIDMFLEDAMAGPQVAASGAIDRLAGLVKALQAVNGT
TWHDTFLGLWIAALRLVQRERDIIEGPVPRLDTCLCMLLSITTLVVANIVEEEESELIDE
TDCSASNPTKEKQTMGRCRKGLISSLQMLGDYEALLTPPQAVCSVANQAAAKAIMFHSGL
TVGNGYYECMSINDMPMNCSGNLRHLIIEACISRNLLDTSAYLWPGYVNVRANIPHSVPS
QVPGWSSLMKGSPLTPTLINALVATPASSLPEIEKIYEIATKGSDDEKISAASILCGASL
VRGWNIQEQVVLFIISLLSPPVPADYSGSESHLIRYAPFFNVLLVGISPVDCIQIFSLHG
MVPLLAGALMPLCEVFGSTAPNVSWTLPTGEELTSHAVFSNAFTILLMLWKFDHPPVEHV
MRDATPVGSERSPDYLLLVRNSKLSAFGKSAKDRLKIRRMSKILNFCMEPIFMDSFPKLK
RWYRQHQKCIASTLSGLVQGTTVHQIVDALLNMMFRKIGRAAQSSTSTTSGSSSSSASGA
EDILARLKVPAWDILEGAPYVLDAALTACAHGRIAPRELATGLKDLADFLPATLGTIISY
FSAEVTRGIWKPVFMNGTDWPSPLANLSVVLQQIKKFIAATGVDVPSLETGGSSPAMLPL
PLAALVSLTITYKLDKSSERSLVLLGPAMSSLGGSCPWPCMPIISALWAQKVKRWNDFLV
FSSARTVFHHNSDAVVQLLRSCFTATLGLSPSIMCSNGGVGALLGHGFGSHFSGGMAPVS
PGIMYLRSHRTIRDIMFMTEEIVSLLMFSVKEIASRLSQEKMEKLKKTTFGLRYGQVSLG
TAMTRVKLAASLGASLVWLSGGLSLVQSLIKETLPSWFISAHTPELDRGEPGGVVSMLRG
YALAYFAVLCGTFAWGVDSVSPESRRRPKVLDSHLEFVASALDGKISLGCDYATWRAYVT
GFVSLMVGCTHKWVLDVNVDVLKRLSNGLRQWNEEELAIALLGLGGATAAGTAAELIVEI
GA
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggaggttggtccggtatgggaatcagttctggagcagactaaatctgctcaggacaag
aacagtgacccacttgtttgggcggttcaactcagttctaggcttaactcagctggggtt
tcattgccttcgatcgacctggctcatcttcttgtttctcacatctgctgggataatcac
ttgcccattacgtggaagttcctggagaaggccttgactgccaatttcgtccctcctatg
ctcgttcttgcccttctctctacgagggtcattccaaagcgtaagtttcatcctacagca
tatcggctttacatggaactccttaggagacatgcctttccacttaaatgtcaaatcaat
gggcaaaattatcaaaagattatgaaatcaatagatgatgttctacatctttccctgata
tttggtgttcaagtgtctgaacctggtctgcttctagttgaatttgttttttcaattgta
tggcaactgcttgatgcttcactagatgatgaagggttactggaacttacaccagaaaag
agatctatatggcccactgtaactcaagacatggaaatagataccgctgacaactttaat
gagacgagaagtgcacaccatgatgtgctgtataaaggaaatactatgatagctattgag
ataattggggaatttctgcaaaataaagtgacttctaggattcttttcttggcacgaaga
aacatgccatcacattgggaagctttcattcagcaattaagagttcttgcagcaaagtca
gtggaattgagaaattcaaaacatattacaccagagaaccttctgcagctgacatctgat
acacataacgttctatctagagaatgtaaaagaatatctcaacaagcgttacatgctgtt
atgggcgatgggtccctaacatctccatctggtcagtggcacggaactagtccatctgca
ctttggcttcctattgatatgtttcttgaggatgctatggctggaccccaggtggctgca
agtggtgctattgatagacttgctggtttagtaaaggctttacaagcagtcaatggtaca
acatggcacgatacatttctaggtctatggattgcagctttgaggcttgttcaaagggaa
agggacattattgagggtcctgtacctcgcctcgatacctgcttgtgcatgttattgtct
atcaccacgcttgtggtggccaatattgttgaggaagaggaaagtgagttgattgatgaa
actgattgtagtgcgtcgaatccaacaaaagagaagcaaaccatgggaagatgtcgtaag
ggtttaatatccagcttacagatgttgggcgattatgaggctttattgactccacctcaa
gcagtttgttcagtagccaaccaggctgctgccaaagcaatcatgtttcattctggtctc
acagttggcaatggatactatgagtgcatgagcattaatgacatgcccatgaattgctct
ggaaacttgcggcatctgattattgaggcttgtatttccagaaatctattggacacgtca
gcatatctctggccaggctatgtaaatgtacgtgctaatataccccatagtgttcctagt
caagtgcctggttggtcgtcgttgatgaaaggatcccctctaactcctacgttgataaat
gcgttggttgctactccggcttctagcttaccagagatcgagaaaatatacgagattgca
accaaaggttcggatgatgagaagatatctgctgctagcattctttgtggggcatctcta
gtgcgtggttggaatatacaggaacaagttgttctcttcattataagtttgttgtcgcca
ccagttcctgctgactattctgggagtgagagccatttgatcagatatgccccatttttt
aatgttcttcttgttggaatatcacctgtagattgcatccagatcttctctttacatggc
atggttcccctactcgctggtgcattgatgcccctttgtgaggttttcgggtcaactgct
cccaatgtttcgtggactcttccaacgggggaagaactgactagtcatgcggttttcagc
aatgcattcactattctactgatgttatggaagtttgatcatccacctgttgaacatgtg
atgagagatgcaacaccagtgggatctgaacgaagtcctgattatctgttgttggttaga
aactctaaattatcagcttttggcaaatcagcgaaggatcgtttgaaaattagaagaatg
tcaaaaattttaaacttctgtatggaacccatttttatggattcctttcccaagttaaaa
cgctggtaccggcagcatcaaaaatgcattgcttcgaccctatcagggcttgtacaaggg
accactgttcatcagattgttgatgcactcctcaatatgatgtttcggaagataggcagg
gctgctcagtcttcaacttctacaacttccggaagtagtagttcttctgcatctggagct
gaggatatcttggcaagactaaaagtgccagcatgggatatcctggaaggagctccctat
gtgcttgatgcagcgctgacagcctgtgcccatggaagaatcgcaccccgtgaactggca
acaggactcaaagatcttgctgatttccttccggcaaccctgggaaccatcattagctac
ttctctgctgaagtaacacgaggtatatggaagcccgtttttatgaatggaacagattgg
cctagtcccttggcaaatttatccgtcgttctgcaacaaatcaaaaaatttattgctgcc
actggtgttgatgtcccaagccttgaaacagggggaagctctccggctatgcttcctttg
cccttggctgctctcgttagcctcacgataacctataaacttgataaatcctctgagcgc
tcccttgtattacttggcccagcaatgagttccctaggtgggagttgtccttggccatgt
atgcccatcatatctgcactatgggctcagaaggttaagcggtggaatgatttccttgta
ttctcttctgcccgtactgtcttccaccacaacagcgatgctgtagttcagcttcttagg
agttgcttcacggctactctcggattaagcccttctatcatgtgcagcaacggtggagtg
ggtgcactcctcggtcatggatttggctctcatttctcagggggaatggctccggtttcc
ccagggattatgtacttacgatcacatcgaacaatcagagatatcatgtttatgacagaa
gaaatcgtttctcttttaatgttttctgtaaaagagattgccagtaggttatcccaggag
aaaatggagaagctgaaaaagacgacgtttggactgagatatggccaagtttctcttgga
acagcaatgacacgagtcaaacttgctgcttcacttggggcttcattggtttggctatcc
ggtggattaagcttagtccaatcattgattaaagaaacattaccttcttggttcatatca
gcccatacacctgagctggaccgtggggaacctggaggtgtagtttccatgctaaggggt
tatgcacttgcatactttgctgtactttgtggtacattcgcatggggtgtggactcagtc
tcaccagaatcaagacggcgaccaaaagttctcgactcacacttggaatttgttgcaagt
gcattagatgggaaaatatcgctcggatgtgattatgccacttggcgtgcatacgtaact
ggttttgtgagcctgatggtaggttgcactcacaagtgggttttggatgtcaatgttgat
gttttgaaaaggctgagcaatggattgaggcagtggaatgaggaagaactggctatagct
ttgctcggacttggcggtgccactgctgctggcacagctgctgagttgattgtcgaaatc
ggagcttaa
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