Gossypium arboreum (tree cotton): 108473790
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Entry
108473790 CDS
T05776
Name
(RefSeq) serine/arginine-rich splicing factor SR34B-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108473790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108473790
Spliceosome [BR:
gab03041
]
Common components
Common spliceosomal components
SR proteins
108473790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108473790
NCBI-ProteinID:
XP_017631035
LinkDB
All DBs
Position
4:complement(27105126..27109689)
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AA seq
334 aa
AA seq
DB search
MSSRSSRTLYVGNLPGDVREREVEDLFYKYGPIAQIDLKIPPRPPGYAFVEFEEARDAED
AIRGRDGYDFGGHRLRVELAHGGRGRSSIDRHSSYSSGRGRGPSRRSEYRVLVTGLPSSA
SWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAYV
RVKEYDSRRDSSRSPSRGRSLSRSRSRSRSRSKSRGRSYSRSKSRSKSPKAKPSRKSPEK
SRSRSPRSRSASRSRSLSRYGYMQQTGDWILGSCGNMVQLHAIVWLQRSPSRSRSPLPSR
QKGRSKSPKRRSVSRSPSGSRSRSRSRSKSVSGS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgttccagcaggactctttacgttggaaatcttcccggtgatgttcgcgag
agggaagtggaagatttgttttataagtatggtcccatagctcaaattgacttgaagatt
ccaccaaggcctccaggttatgcatttgttgagtttgaagaagctcgagatgctgaagat
gccattcgtggtcgtgatggatatgactttggagggcatcgtttacgggttgaacttgct
catggtggtcgtgggcgctcttccatagatcgtcacagcagttatagtagtgggcgtgga
cgtggaccatccaggcgttctgaatatcgcgtgctagttactggattgccatcttctgct
tcatggcaggacctcaaggatcacatgcgtcgagcaggagatgtttgtttttctcaagtt
ttccgtgatggtagtgggactacagggattgtggactacaccaactatgatgatatgaag
tatgctattaagaaactcgatgactctgagtttcgtaatgcattttctcgggcatatgtt
cgggttaaggaatatgattctaggcgggattcctctagaagccctagtcgtggccgatct
ctctcaagaagccgaagccgaagtagaagccgaagcaaaagccgtggtcggagctatagc
cgaagcaagagccgcagcaagtctccaaaggcaaagccttcgcgcaagtcacctgaaaag
tctagatcaaggtctcctcgttcccgctctgcatcaaggtctcgctctttgtcaagatat
ggatatatgcagcaaactggggattggatattgggatcttgtgggaatatggttcaattg
catgcaatcgtttggttgcagagatctccctcaaggtccaggtctcctttgccttctcgt
caaaaaggaaggagcaagagtcccaaaagacgcagtgttagcaggagtccaagtgggagc
aggagcaggagcaggagcaggagcaagagtgtatccgggtcttga
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