Gossypium arboreum (tree cotton): 108474048
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Entry
108474048 CDS
T05776
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108474048
Membrane trafficking [BR:
gab04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108474048
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
DUF974
Motif
Other DBs
NCBI-GeneID:
108474048
NCBI-ProteinID:
XP_017631421
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Position
4:130667550..130678749
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AA seq
1286 aa
AA seq
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MADPASTPLGKMLLEEITPVVMVLCTPYVEESCLKNGLSLIQLLSPFCDFTNIDVPVRTA
SDQPYRLRKFKLRLFYSSDIRQPNLEVAKERLKKVITHVGEKNFLESSDPSQVNNLLSRP
ESEMLPSWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSKDDEPVNRFVDLFNTNKLPS
LLNDGAMDPKIMKHYLLLHDNQDGPFNKATKLLADMRNAFGQNDCQIICFNSSQDGKIHH
QDNPWAPFKSDALPTENLGCFLNLDDLNEIKDFMQELSSKHIIPYMEQKIRVLNQQVSAT
RKGFRNQIKNLWWRKGKEDTIDTPNGPVYTFNSIESQIRILGDYAFMLGDYELALSNYRL
ISTDYKLDKAWKRYAGVQEMMGLTYFLLDQSRKDAEYCMENAFNTYLKLGSAGRRNATRC
GLWWAEMLKTRDQLKEAATVYFRICGEDTLHSAVMLEQASFCYLLSKPPMLHKYGFHLVL
SGDHYKKCDQIKHAICTYRSAIPVYKGTTWSLIKDHVHFHIGQWYALLGMYDVAVTHMLE
VLASTHQSKTTQELFLRDFLQIVQKTGKTFEVLKLQLPVINISSLKVIFEDQRTNASAAA
ASVKESLWRSLEEDMIPSSTARSNWLELQSKIIPRKYKESNICVAGEALKVAIEFKNPLQ
IRISVSSVSLMCELSANPEEDANSSNNEVQNNEDRTSTSSGDINSCLILSEVDFSLEGGE
TTVVQLTVTPRIEGILKIVGVKWKLSSAVVGLCNFEFNPVNKSVVRGRRKQHSPSSDLKF
LVIKSLPRLEGFIHSLPEKTYAGDLRPLVLELSNQSKFPVKNLKMKISNPRFLYAGNQKE
LNADFPACLKKKMNVEKSGSHANVNKTLQNLFHFPEDISVQEETSLSWPLWFHAAVPGSI
PLYITIYYEMEGVSSIMKYRTLRMHYNLQVLPSLDVSFQLSTRPSRSQEFLLRMDVVNKT
SSECFQVHQLSSVGQQWEISLLQPVDSILPSQSLFAGQSLSCFFMLKDRRRSSTSEDSIP
SLSHIQSDVRLGPQDNSEAFFDVSSSPLADFHDCERSSQGMSSQGCEYKVDFVFIAQLPK
GNRDSSSNAPLVFSHHACDCSPSSMSPISWLVDGPRTIQHNFSAPLCEVNLKMTITNSSD
AIASVHINTFDSPSSNNQPINDATTSQPPEHQSGWSEIPIVNDTKIITTEALTTRVPKSL
SLESVPQYIWSGTSSTKLVLQPRSTAEIPLQICVFTPGIYDLSNYVLNWILTPVNDGENQ
GEANKSSGVCQGYPYYLSVLESNFKD
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccggccagcacgccacttggcaaaatgctattggaggagatcactcctgtt
gttatggtactctgtactccatacgtagaagaatcttgccttaagaacggtctttcctta
attcaattgctctcacctttctgcgacttcaccaacattgacgtgcctgtacggacggcg
agtgatcaaccctacaggctgaggaagttcaaattgcgcttgttttactcctctgatatt
cgacaaccgaatctcgaggtagcaaaggaaaggctaaagaaggttattacccatgtggga
gagaaaaattttctcgaatcttctgacccatctcaagttaacaatcttctctctaggcct
gagtctgaaatgttaccatcatggtttcagttttttaacaaagagcttgtacgtaccttg
tctttttcagatcatgaagcttttgaccatcctgtggcatgccttttggttgtttcgtcg
aaggatgatgaacccgtaaacagatttgtagacctctttaacaccaacaaattgccttct
cttctcaatgacggtgcaatggacccaaagataatgaagcattacttacttttgcacgat
aatcaagatggccctttcaataaggctactaaacttttggcagacatgagaaatgcattt
ggacaaaatgactgtcaaataatttgctttaactcttctcaagatgggaaaatccatcat
caagataatccttgggccccatttaaatctgatgctttacctactgaaaatcttggttgt
ttcctcaatcttgatgacttgaacgagataaaggattttatgcaagaattatcatctaaa
catatcattccttacatggaacaaaagatacgtgtgttgaaccaacaggtttctgctaca
aggaaaggttttaggaaccaaattaaaaatttgtggtggaggaaggggaaagaagataca
atagacacccctaatggtcctgtgtatacctttaattcaattgaatctcagattagaatc
ttaggtgactatgcattcatgttaggagactatgaacttgcactatcgaattatcgccta
atttccaccgattacaagcttgataaagcctggaagcgctatgctggtgtgcaggagatg
atggggcttacatacttcttgcttgatcaatcaagaaaagacgcagagtattgcatggaa
aatgcatttaatacttatttaaaacttggatcagctggccgacgaaatgctactagatgt
ggtctctggtgggcagagatgctgaagacaagagatcagcttaaagaagctgctactgtt
tattttcgcatttgtggtgaggatactttacattcggctgtgatgcttgagcaagcatct
ttttgctacttgttatcaaaaccaccaatgttgcataaatatgggtttcatcttgttctc
tctggtgatcattacaaaaaatgtgatcagattaaacatgcaatttgcacatatagaagt
gctattcctgtttataagggaaccacttggagtctcatcaaagatcacgttcatttccac
attggacagtggtatgctttacttggcatgtatgatgttgctgtcactcatatgttggag
gtcttggccagcactcatcagtcaaagacaacgcaggagctctttcttagagattttctt
cagattgtccagaaaactgggaagacatttgaggtgctcaaacttcagttgcctgttatc
aacatttcctcccttaaggtcatttttgaagatcagagaactaatgcatctgctgcagct
gctagtgtcaaagaaagtttatggcgttcactggaggaggacatgatcccatcgtctact
gccaggtccaactggctggaattacagtcaaagattataccaagaaagtataaagaatca
aatatttgtgtggcaggagaagcattaaaagtggctattgaatttaaaaaccctctacaa
atccgtatttctgtctcaagtgtttctttgatgtgtgagctctctgcaaatcctgaagaa
gatgctaatagttcgaacaatgaggtccagaataatgaagacagaacatcaacctcctct
ggggatattaactcatgtttgattttatctgaggttgacttttccttagaagggggtgaa
acaactgtggtgcaactaactgttactccaagaatagaaggcattctgaaaattgttggt
gtgaaatggaaattgtcaagtgccgtcgtgggtttatgtaattttgagtttaaccctgtg
aacaaaagcgttgtcaggggaagaaggaaacagcattctcctagcagtgacttgaagttt
ctagtgattaagagtctacccagacttgagggttttattcattctttaccagaaaaaacc
tatgcgggtgacttacggcctcttgtgttggaactaagtaaccaatcaaaatttcctgtc
aagaacctaaagatgaagatcagcaatcctagatttctatatgctgggaaccaaaaggag
ttgaatgcagactttcctgcatgcttaaaaaagaagatgaatgttgagaaaagcggcagt
catgctaatgttaataaaacattgcagaatttgtttcactttcccgaggacatatccgtg
caggaggaaacatcattatcatggcccctttggtttcacgctgctgttcctggaagtatt
cctttgtacattacaatatattacgaaatggaaggtgtatcaagcatcatgaaatatcgc
actctacgcatgcattataatttgcaggttttaccttcattggatgtatcgtttcaactt
agtactcgcccatcaagatcgcaagagttcctcttgcgcatggatgttgtcaacaagacg
agttccgaatgtttccaggttcatcagttgtcgtctgttgggcagcaatgggaaatctca
ttgcttcaacctgtcgatagcatcttaccttctcagtctttatttgctggccagtcactt
tcgtgtttcttcatgcttaaggatcgcaggaggtcatcaacttctgaagatagtatccct
tctctttcacatattcaaagtgacgtaaggttgggccctcaggataacagtgaagccttc
tttgatgtatcgagttcacctttggccgatttccatgactgtgaaagatcatcccaggga
atgtcatctcaggggtgtgaatataaagttgatttcgtgttcatcgctcaactgccgaag
ggtaatcgtgattccagttctaatgcaccacttgtgttttcccatcatgcttgtgattgc
agtccttctagcatgagtccgatatcatggttagtagacggacctcgaaccattcaacat
aacttctcggctcctctatgtgaagtaaacttgaagatgactataaccaactcatccgat
gccattgcatccgtccatatcaacaccttcgattcccctagtagtaacaaccaaccgatc
aacgatgccaccacatctcagcctccagaacaccaatcagggtggtcagaaattcccatc
gtgaacgatacaaagatcatcacaactgaagccctcacaacccgtgttcccaaatcatta
tccctcgaaagtgtcccccaatacatttggtcaggcacaagctccactaaactcgtactt
caacctcggtcaacagctgaaatccctcttcagatttgtgttttcactcccgggatatac
gacttatcaaactacgtcttaaattggatccttacgcctgttaacgacggagaaaaccaa
ggagaagcaaacaagtcatccggagtttgccagggatatccgtattacctatccgtgctc
gaatctaattttaaagattag
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