KEGG   Gossypium arboreum (tree cotton): 108474250
Entry
108474250         CDS       T05776                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108474250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gab03400]
    108474250
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     108474250
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert
Other DBs
NCBI-GeneID: 108474250
NCBI-ProteinID: XP_017631684
LinkDB
Position
4:complement(56265615..56271809)
AA seq 470 aa
MGAYCDENLSFSPACNLSPSHDLRLSKHVHDNVHGNIYLDPLSLKFIDTEQFQRLRELKQ
LGLAHLVYPGAVHSRFEHSLGVYWLAGEAIQKLKTYQGLELGIDRFDVQAVKVAGLLHDV
GHGPFSHLFEREFLPKVLNSFKWAHEQMSADLIDHIVDVHHIDVESEMIKRVKEMILASS
EFALPKSAKEKQFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCSFDFHRLMETMRVLGD
EICYRAKDYLSIHKLFATRADLYRTVYTHSKVKAVELMVVDALLKANSYLEISSSIQDPS
EYWKLDDTIIKTIETAPDEELRESRDLILRIRRRNLYQFCNEYSVPKDQLEHFKDVTAQD
IACSQKNGVLLQENDIAVSNVRIDLTRGKQNPLESINFFKDYESREKFPIPHERISHLLP
TSYQDMIVRVYSKKPELVAAVSEAFENFQLKIYGVKAQVHATPEKKKRRF
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggcgcttactgtgatgaaaatctctctttctctccggcttgtaatttgtctccatct
cacgacctccggctctccaaacacgtccacgacaacgttcacggcaacatttatctcgat
cccctctctttgaagtttattgacaccgagcaatttcaaaggctccgtgagctgaaacaa
cttggattggcacacctggtttatccaggggccgtacattccaggtttgagcattctctt
ggtgtgtattggcttgcgggtgaagctatccaaaagctcaaaacttatcagggtttggag
cttggtattgatcgatttgatgttcaagcagtgaaagttgcaggacttttacatgatgta
ggccacggaccttttagccacttgtttgaacgggaatttctccccaaagttcttaatagc
ttcaaatgggctcatgagcaaatgtcagcagatctgattgatcatattgttgatgtgcac
catatcgatgttgaatctgagatgattaaaagagtcaaggaaatgatactagctagctct
gagtttgcactgccaaaaagtgcaaaggagaagcaattcttatatgatattgttgcaaat
ggtcggaatggaattgatgtggataagtttgattacattgtccgtgacagtcgagcttgt
ggcctaggatgcagctttgatttccacaggttgatggagactatgcgagttttgggtgat
gagatctgctatcgtgctaaagactatcttagcatccacaagttatttgctactcgtgct
gatctttatcgaactgtgtacacccactctaaagtgaaggctgttgagctaatggtagta
gatgctcttttaaaagctaatagttatctagaaatctcttcttccattcaggatccttct
gagtactggaagctagatgacacaataatcaaaactatcgagacagcaccagatgaagaa
ctccgagaatctagagatttgattctgcgcattcgtaggagaaatttgtatcagttctgt
aatgagtattcagttccaaaagaccaattggaacatttcaaagacgtcactgcacaagac
atcgcttgttcccagaaaaatggtgtactgctgcaagaaaatgatattgctgttagcaat
gtcaggattgatttgactcgtggaaagcaaaatcctctcgaaagcatcaactttttcaag
gattatgagagtcgggagaagttccccataccacatgaacgcatcagtcacttgctgccc
acatcttatcaggatatgatagtgagagtgtattcgaagaaacctgaattggtagcagct
gtctctgaggcattcgaaaattttcaactaaaaatctacggagttaaagctcaagtgcat
gctacacctgagaagaagaaacggcgcttttaa

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